RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 LRRC15Q8TF66 581 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 DCAF4Q8WV16 495 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 CCDC17Q96LX7 622 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 NAP1L3Q99457 506 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 SLITRK6Q9H5Y7 841 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 VAT1LQ9HCJ6 419 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 STARD7Q9NQZ5 370 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 RBM12Q9NTZ6 932 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 TMEM260Q9NX78 707 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 MTMR4Q9NYA4 1195 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 AIPL1Q9NZN9 384 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 GGA2Q9UJY4 613 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 FBXL5Q9UKA1 691 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 PCDHA12Q9UN75 941 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 TFR2Q9UP52 801 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 PHF24Q9UPV7 400 aa9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 DIS3Q9Y2L1 958 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-223ENST00000520520 FRMPD2Q68DX3 1309 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 CUL9Q8IWT3 2517 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 IGKV6D-41A0A0C4DH26 115 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 GTPBP10A4D1E9 387 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 MYADML2A6NDP7 307 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 DCDC2CA8MYV0 355 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 ZBTB5O15062 677 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 SLC37A4O43826 429 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 TBCAO75347 108 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 PALMO75781 387 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 C6orf222P0C671 652 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 ZNF865P0CJ78 1059 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 MYBL2P10244 700 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 FERP16591 822 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 GAP43P17677 238 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 DNAJB2P25686 324 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 GBP1P32455 592 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 HSPA9P38646 679 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 CCT5P48643 541 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 CLK2P49760 499 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 POLR2FP61218 127 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 GUCY2DQ02846 1103 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 BIRC3Q13489 604 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 GRIN2CQ14957 1233 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 KCNA10Q16322 511 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 KIAA0753Q2KHM9 967 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 ZNF792Q3KQV3 632 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 SPDYCQ5MJ68 293 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 EMC10Q5UCC4 262 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 HGSNATQ68CP4 663 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 CROCCP2Q86T23 111 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 CCDC26Q8TAB7 109 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 ACTRT1Q8TDG2 376 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 DNAJC19Q96DA6 116 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 MTMR8Q96EF0 704 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 CCDC43Q96MW1 224 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 INPP4AQ96PE3 977 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 PPP1R12CQ9BZL4 782 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 KANSL2Q9H9L4 492 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 NLRC4Q9NPP4 1024 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 PRDM6Q9NQX0 595 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 HOMER2Q9NSB8 354 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 ARMCX3Q9UH62 379 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 PPP1R9AQ9ULJ8 1098 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 DUSP10Q9Y6W6 482 aa9.36□□□□□ -0.91
CTNNA1-223ENST00000520520 GREB1LQ9C091 1923 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 GOLGA6L10A0A0M3HER8 536 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 FRMD3A2A2Y4 597 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 GRXCR1A8MXD5 290 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 GCOM1H8Y6P7 765 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 PDXKO00764 312 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 TRIM66O15016 1216 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 EPHB6O15197 1021 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 NCK2O43639 380 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 BUB1O43683 1085 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 FOSP01100 380 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 MYZAPP0CAP1 466 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 ACRP10323 421 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 NR1D1P20393 614 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 RFX1P22670 979 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 NR2F2P24468 414 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 PRKCIP41743 596 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 ACLYP53396 1101 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 NPEPPSP55786 919 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 FAAP100Q0VG06 881 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 DRP2Q13474 957 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 HLTFQ14527 1009 aaKnown RBP eCLIP9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 PLCB4Q15147 1175 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 CDC37Q16543 378 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 HERC4Q5GLZ8 1057 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 ICE2Q659A1 982 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 MMS22LQ6ZRQ5 1243 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 MAATS1Q7Z4T9 603 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 SUGP1Q8IWZ8 645 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 LRRC47Q8N1G4 583 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 USP38Q8NB14 1042 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 TBC1D5Q92609 795 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 HPS3Q969F9 1004 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 ATP6V1G3Q96LB4 118 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 GDAP1L1Q96MZ0 367 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 ZIM3Q96PE6 472 aa9.35□□□□□ -0.91
CTNNA1-223ENST00000520520 KRT12Q99456 494 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms