RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 TMPRSS6Q8IU80 811 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 UNC5BQ8IZJ1 945 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 CACTINQ8WUQ7 758 aaKnown RBP5.4□□□□□ -1.54
SQLE-204ENST00000520493 CCDC136Q96JN2 1154 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 C8orf48Q96LL4 319 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 WNT8AQ9H1J5 351 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 EPC1Q9H2F5 836 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 SPTLC3Q9NUV7 552 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 USP18Q9UMW8 372 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 GOLGA6L6A8MZA4 724 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 NEMP1O14524 444 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 TGM5O43548 720 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 GPR15P49685 360 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 NEK2P51955 445 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 DGCR2P98153 550 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 MTMR1Q13613 665 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 SPIDRQ14159 915 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 FAM50AQ14320 339 aaKnown RBP5.39□□□□□ -1.55
SQLE-204ENST00000520493 TERF2Q15554 542 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 DDB1Q16531 1140 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 LMBR1LQ6UX01 489 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 FMNL3Q8IVF7 1028 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 DNAJC10Q8IXB1 793 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 ZNF483Q8TF39 744 aaPredicted RBP5.39□□□□□ -1.55
SQLE-204ENST00000520493 RSAD2Q8WXG1 361 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 ZNF496Q96IT1 587 aaPredicted RBP5.39□□□□□ -1.55
SQLE-204ENST00000520493 ZNF512Q96ME7 567 aaPredicted RBP5.39□□□□□ -1.55
SQLE-204ENST00000520493 GPR87Q9BY21 358 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 IKZF4Q9H2S9 585 aa5.39□□□□□ -1.55
SQLE-204ENST00000520493 REXO2Q9Y3B8 237 aaKnown RBP5.39□□□□□ -1.55
SQLE-204ENST00000520493 ELL2O00472 640 aaPredicted RBP5.38□□□□□ -1.55
SQLE-204ENST00000520493 PLSCR1O15162 318 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 KDM1AO60341 852 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 ALDH1A2O94788 518 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 PFKMP08237 780 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 ADH4P08319 380 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 GAAP10253 952 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 MAKP20794 623 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 ADCYAP1R1P41586 468 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 MCL1Q07820 350 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 ITKQ08881 620 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 ATP13A4Q4VNC1 1196 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 SYDE2Q5VT97 1194 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 CXorf67Q86X51 503 aaPredicted RBP5.38□□□□□ -1.55
SQLE-204ENST00000520493 GLB1L2Q8IW92 636 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 ATXN2LQ8WWM7 1075 aaKnown RBP5.38□□□□□ -1.55
SQLE-204ENST00000520493 GAB3Q8WWW8 586 aa5.38□□□□□ -1.55
SQLE-204ENST00000520493 NOC2LQ9Y3T9 749 aaKnown RBP5.38□□□□□ -1.55
SQLE-204ENST00000520493 PCSK5Q92824 1860 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 A0A0A6YYK5 440 aaPredicted RBP5.37□□□□□ -1.55
SQLE-204ENST00000520493 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.37□□□□□ -1.55
SQLE-204ENST00000520493 KIF3BO15066 747 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 NARSO43776 548 aaKnown RBP5.37□□□□□ -1.55
SQLE-204ENST00000520493 PPFIA2O75334 1257 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 KATNA1O75449 491 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 PEX11BO96011 259 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 SCNN1GP51170 649 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 SESN3P58005 492 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 KRT85P78386 507 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 PURAQ00577 322 aaKnown RBP5.37□□□□□ -1.55
SQLE-204ENST00000520493 PPARAQ07869 468 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 HLTFQ14527 1009 aaKnown RBP eCLIP5.37□□□□□ -1.55
SQLE-204ENST00000520493 CSRP2Q16527 193 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 ZBTB41Q5SVQ8 909 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 Q6ZRM9 215 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 LHFPL2Q6ZUX7 228 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 APBB1IPQ7Z5R6 666 aaPredicted RBP5.37□□□□□ -1.55
SQLE-204ENST00000520493 ELOA2Q8IYF1 753 aaPredicted RBP5.37□□□□□ -1.55
SQLE-204ENST00000520493 MB21D1Q8N884 522 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 OR5M3Q8NGP4 307 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 PPP1R14CQ8TAE6 165 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 ST8SIA2Q92186 375 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 SLC5A5Q92911 643 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 CHMP4CQ96CF2 233 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 SOX7Q9BT81 388 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 EMC7Q9NPA0 242 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 CEP72Q9P209 647 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 HECAQ9UBI9 543 aaPredicted RBP5.37□□□□□ -1.55
SQLE-204ENST00000520493 NUMBLQ9Y6R0 609 aa5.37□□□□□ -1.55
SQLE-204ENST00000520493 LY86O95711 162 aa5.36□□□□□ -1.55
SQLE-204ENST00000520493 TMPRSS15P98073 1019 aa5.36□□□□□ -1.55
SQLE-204ENST00000520493 DUSP2Q05923 314 aa5.36□□□□□ -1.55
SQLE-204ENST00000520493 CD69Q07108 199 aa5.36□□□□□ -1.55
SQLE-204ENST00000520493 PPP2R5AQ15172 486 aa5.36□□□□□ -1.55
SQLE-204ENST00000520493 BROXQ5VW32 411 aa5.36□□□□□ -1.55
SQLE-204ENST00000520493 IQSEC1Q6DN90 963 aa5.36□□□□□ -1.55
SQLE-204ENST00000520493 CERS3Q8IU89 383 aa5.36□□□□□ -1.55
SQLE-204ENST00000520493 CNTD1Q8N815 330 aa5.36□□□□□ -1.55
SQLE-204ENST00000520493 MDGA1Q8NFP4 955 aa5.36□□□□□ -1.55
SQLE-204ENST00000520493 ING3Q9NXR8 418 aa5.36□□□□□ -1.55
SQLE-204ENST00000520493 HDAC5Q9UQL6 1122 aa5.36□□□□□ -1.55
SQLE-204ENST00000520493 PRSS38A1L453 326 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 PLEKHD1A6NEE1 506 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 TSPAN6O43657 245 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 SEC24DO94855 1032 aaPredicted RBP5.35□□□□□ -1.55
SQLE-204ENST00000520493 WNT3AP56704 352 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 MGAT5Q09328 741 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 DCAF17Q5H9S7 520 aaPredicted RBP5.35□□□□□ -1.55
SQLE-204ENST00000520493 RASSF3Q86WH2 238 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 AMER2Q8N7J2 671 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms