RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 WDR5P61964 334 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 CREMQ03060 361 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 KRT17Q04695 432 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 DNM1Q05193 864 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 RNASELQ05823 741 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 PSMD2Q13200 908 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 LPIN1Q14693 890 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 KARSQ15046 597 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 PTPAQ15257 358 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 TRIM71Q2Q1W2 868 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 TMEM240Q5SV17 173 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 PPP2R2DQ66LE6 453 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 FAM109BQ6ICB4 259 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 CNNM4Q6P4Q7 775 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 SLC27A1Q6PCB7 646 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 ZPBP2Q6X784 338 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 THSD4Q6ZMP0 1018 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 RUFY4Q6ZNE9 571 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 RBM43Q6ZSC3 357 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 ZNF771Q7L3S4 317 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 HS2ST1Q7LGA3 356 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 SH3RF1Q7Z6J0 888 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 SYCP3Q8IZU3 236 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 LRRC43Q8N309 656 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 FIBCD1Q8N539 461 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 ZNF397Q8NF99 534 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 DBF4BQ8NFT6 615 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 LEO1Q8WVC0 666 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 TRAPPC12Q8WVT3 735 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 GJA10Q969M2 543 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 TMEM143Q96AN5 459 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 TIFAQ96CG3 184 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.18□□□□□ -1.421e-7■■□□□ 11.9
CTNNA1-220ENST00000520260 C11orf84Q9BUA3 381 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 TRAIPQ9BWF2 469 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 TMEM134Q9H6X4 195 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 MRPL44Q9H9J2 332 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 GDPD2Q9HCC8 539 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 RGS18Q9NS28 235 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 KCND1Q9NSA2 647 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 AGPAT5Q9NUQ2 364 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 EXOC1Q9NV70 894 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 SLC38A7Q9NVC3 462 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 TFIP11Q9UBB9 837 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 DPP7Q9UHL4 492 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 KCNH3Q9ULD8 1083 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 PADI3Q9ULW8 664 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 ST3GAL5Q9UNP4 418 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 SSX2IPQ9Y2D8 614 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 PCDHB12Q9Y5F1 795 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 PCDHGA4Q9Y5G9 962 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 CENPFP49454 3210 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 A0A087WZ62 844 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 PVALEFA0A1B0GWK0 134 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 ZBTB42B2RXF5 422 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 ACKR2O00590 384 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 HNRNPDLO14979 420 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 NCK2O43639 380 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 HIP1RO75146 1068 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 GPR32O75388 356 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 GJB5O95377 273 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 CHRNA1P02708 482 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 PRKCBP05771 671 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 RB1P06400 928 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 ITGA4P13612 1032 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 LAG3P18627 525 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 ATP4AP20648 1035 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 PTGS1P23219 599 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 CD52P31358 61 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 ARL2P36404 184 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 ALDH7A1P49419 539 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 ZNF75DP51815 510 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 PEX3P56589 373 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 ASIC1P78348 528 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 ZNF200P98182 395 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 FAM160A1Q05DH4 1040 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 MGAT3Q09327 533 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 TMEM62Q0P6H9 643 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 BTG3Q14201 252 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 DHX8Q14562 1220 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 TERF2Q15554 542 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 FAM187BQ17R55 369 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 FOXD4L6Q3SYB3 417 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 HERC4Q5GLZ8 1057 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 RESP18Q5W5W9 173 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 CDCA2Q69YH5 1023 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 PDE12Q6L8Q7 609 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 RINT1Q6NUQ1 792 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 PDXDC1Q6P996 788 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 FOXD4L3Q6VB84 417 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 HERC6Q8IVU3 1022 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 CD302Q8IX05 232 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 CMTR2Q8IYT2 770 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 KRT222Q8N1A0 295 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 LINC01465Q8N7H1 131 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 CCDC112Q8NEF3 446 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 KIF18AQ8NI77 898 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 DHX38Q92620 1227 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 DHX58Q96C10 678 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 ACCSQ96QU6 501 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms