RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 PPP4R3CPQ6ZMV5 832 aa20.52■□□□□ 0.88
HOXA3-203ENST00000518451 VPS52Q8N1B4 723 aa20.52■□□□□ 0.88
HOXA3-203ENST00000518451 DEPTORQ8TB45 409 aa20.52■□□□□ 0.88
HOXA3-203ENST00000518451 EIF2AQ9BY44 585 aaKnown RBP20.52■□□□□ 0.88
HOXA3-203ENST00000518451 FZD8Q9H461 694 aa20.52■□□□□ 0.88
HOXA3-203ENST00000518451 FAN1Q9Y2M0 1017 aa20.52■□□□□ 0.88
HOXA3-203ENST00000518451 KIAA1671Q9BY89 1806 aa20.52■□□□□ 0.88
HOXA3-203ENST00000518451 POMCP01189 267 aa20.51■□□□□ 0.87
HOXA3-203ENST00000518451 ECM1Q16610 540 aa20.51■□□□□ 0.87
HOXA3-203ENST00000518451 TMEM132AQ24JP5 1023 aa20.51■□□□□ 0.87
HOXA3-203ENST00000518451 ARL6IP4Q66PJ3 421 aaKnown RBP20.51■□□□□ 0.87
HOXA3-203ENST00000518451 ZNF280BQ86YH2 543 aa20.51■□□□□ 0.87
HOXA3-203ENST00000518451 ARL5CA6NH57 179 aa20.5■□□□□ 0.87
HOXA3-203ENST00000518451 HIDE1A8MVS5 230 aa20.5■□□□□ 0.87
HOXA3-203ENST00000518451 INPPL1O15357 1258 aa20.5■□□□□ 0.87
HOXA3-203ENST00000518451 HOXB8P17481 243 aaPredicted RBP20.5■□□□□ 0.87
HOXA3-203ENST00000518451 PDCP20941 246 aa20.5■□□□□ 0.87
HOXA3-203ENST00000518451 CA8P35219 290 aa20.5■□□□□ 0.87
HOXA3-203ENST00000518451 SLC11A1P49279 550 aa20.5■□□□□ 0.87
HOXA3-203ENST00000518451 ATP2C1P98194 919 aaPredicted RBP20.5■□□□□ 0.87
HOXA3-203ENST00000518451 PRPF4BQ13523 1007 aaKnown RBP20.5■□□□□ 0.87
HOXA3-203ENST00000518451 SMRP1Q8NCR6 262 aa20.5■□□□□ 0.87
HOXA3-203ENST00000518451 DNAJB4Q9UDY4 337 aa20.5■□□□□ 0.87
HOXA3-203ENST00000518451 KCNG1Q9UIX4 513 aa20.5■□□□□ 0.87
HOXA3-203ENST00000518451 BARX2Q9UMQ3 279 aaPredicted RBP20.5■□□□□ 0.87
HOXA3-203ENST00000518451 IRAK3Q9Y616 596 aa20.5■□□□□ 0.87
HOXA3-203ENST00000518451 C2orf71A6NGG8 1288 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 ACKR2O00590 384 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 N4BP3O15049 544 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 B4GALT5O43286 388 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 DDHD2O94830 711 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 NPTXRO95502 500 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 GLP2RO95838 553 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 CTSAP10619 480 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 ALADP13716 330 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 ZP2Q05996 745 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 IL17AQ16552 155 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 BRAPQ7Z569 592 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 APBB1IPQ7Z5R6 666 aaPredicted RBP20.49■□□□□ 0.87
HOXA3-203ENST00000518451 CASP10Q92851 521 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 GAD1Q99259 594 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 ADPGKQ9BRR6 497 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 APOL6Q9BWW8 343 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 BACH2Q9BYV9 841 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 NT5C3AQ9H0P0 336 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 RNF39Q9H2S5 420 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 CD320Q9NPF0 282 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 HES2Q9Y543 173 aa20.49■□□□□ 0.87
HOXA3-203ENST00000518451 ARID2Q68CP9 1835 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 PLXNA4Q9HCM2 1894 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 C19orf67A6NJJ6 358 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 PI4K2BG5E9Z4 385 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 NRP1O14786 923 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 BMP15O95972 392 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 CUL4AQ13619 759 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 KCNC3Q14003 757 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 CDK5RAP3Q96JB5 506 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 DRC1Q96MC2 740 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 TIPINQ9BVW5 301 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 ZBP1Q9H171 429 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 PARP2Q9UGN5 583 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 PHLPP2Q6ZVD8 1323 aa20.48■□□□□ 0.87
HOXA3-203ENST00000518451 ZMYM2Q9UBW7 1377 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 PP2D1A8MPX8 630 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 E9PMD0 336 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 K7ERI5 159 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 SLC26A4O43511 780 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 PRKCBP05771 671 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 CDC25AP30304 524 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 MLH1P40692 756 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 AFF1P51825 1210 aaKnown RBP20.47■□□□□ 0.87
HOXA3-203ENST00000518451 TPRNQ4KMQ1 711 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 ANKRD54Q6NXT1 300 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 PPFIBP1Q86W92 1011 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 TMEM173Q86WV6 379 aaPredicted RBP20.47■□□□□ 0.87
HOXA3-203ENST00000518451 BSNDQ8WZ55 320 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 AK8Q96MA6 479 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 COLEC11Q9BWP8 271 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 NXF3Q9H4D5 531 aaKnown RBP20.47■□□□□ 0.87
HOXA3-203ENST00000518451 EPHX3Q9H6B9 360 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 C17orf75Q9HAS0 396 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 SSX2IPQ9Y2D8 614 aa20.47■□□□□ 0.87
HOXA3-203ENST00000518451 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.46■□□□□ 0.87
HOXA3-203ENST00000518451 VWA3AA6NCI4 1184 aa20.46■□□□□ 0.87
HOXA3-203ENST00000518451 LIG1P18858 919 aa20.46■□□□□ 0.87
HOXA3-203ENST00000518451 AKAP5P24588 427 aa20.46■□□□□ 0.87
HOXA3-203ENST00000518451 OR1G1P47890 313 aa20.46■□□□□ 0.87
HOXA3-203ENST00000518451 SCNN1GP51170 649 aa20.46■□□□□ 0.87
HOXA3-203ENST00000518451 ZRSR1Q15695 479 aaKnown RBP20.46■□□□□ 0.87
HOXA3-203ENST00000518451 LLGL2Q6P1M3 1020 aa20.46■□□□□ 0.87
HOXA3-203ENST00000518451 CDR2LQ86X02 465 aaPredicted RBP20.46■□□□□ 0.87
HOXA3-203ENST00000518451 COLGALT2Q8IYK4 626 aa20.46■□□□□ 0.87
HOXA3-203ENST00000518451 VN1R2Q8NFZ6 395 aa20.46■□□□□ 0.87
HOXA3-203ENST00000518451 ZFP42Q96MM3 310 aa20.46■□□□□ 0.87
HOXA3-203ENST00000518451 RPS6KC1Q96S38 1066 aa20.46■□□□□ 0.87
HOXA3-203ENST00000518451 EMILIN2Q9BXX0 1053 aa20.46■□□□□ 0.87
HOXA3-203ENST00000518451 RBM19Q9Y4C8 960 aaKnown RBP20.46■□□□□ 0.87
HOXA3-203ENST00000518451 USP15Q9Y4E8 981 aaPredicted RBP20.46■□□□□ 0.87
HOXA3-203ENST00000518451 MUC3AQ02505 3323 aa20.45■□□□□ 0.86
HOXA3-203ENST00000518451 CCDC169A6NNP5 214 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms