RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 L1TD1Q5T7N2 865 aaKnown RBP13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 EEF1DP3Q658K8 133 aa13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 SLC39A4Q6P5W5 647 aa13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 SLC24A5Q71RS6 500 aa13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 ZNF598Q86UK7 904 aaKnown RBP13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 CDR2LQ86X02 465 aaPredicted RBP13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 KIAA0895Q8NCT3 520 aa13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 ERCC4Q92889 916 aaPredicted RBP13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 CCDC34Q96HJ3 373 aa13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 EIF2AQ9BY44 585 aaKnown RBP13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 MRPL4Q9BYD3 311 aaKnown RBP13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 MTIF3Q9H2K0 278 aaKnown RBP13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 RC3H2Q9HBD1 1191 aaKnown RBP13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 FAM105AQ9NUU6 356 aa13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 EXOC1Q9NV70 894 aa13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 TNFSF13BQ9Y275 285 aa13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 SLC4A7Q9Y6M7 1214 aa13.8□□□□□ -0.2
IGHV3-6-201ENST00000518407 CHD9Q3L8U1 2897 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 PLXNA4Q9HCM2 1894 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 N4BP3O15049 544 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 GCNT3O95395 438 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 AMHP03971 560 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 HOXD13P35453 343 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 KCNJ6P48051 423 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 STRN3Q13033 797 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 STK4Q13043 487 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 PSMD2Q13200 908 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 BMT2Q1RMZ1 405 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 ATF7IP2Q5U623 682 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 TWF2Q6IBS0 349 aaKnown RBP13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 FAM109BQ6ICB4 259 aaPredicted RBP13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 SLC27A1Q6PCB7 646 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 ZPBP2Q6X784 338 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 TMCO2Q7Z6W1 182 aaPredicted RBP13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 ECHDC2Q86YB7 292 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 SMG8Q8ND04 991 aaKnown RBP13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 PHOSPHO2Q8TCD6 241 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 TOP1MTQ969P6 601 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 TARS2Q9BW92 718 aaKnown RBP13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 HAPLN2Q9GZV7 340 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 IKZF4Q9H2S9 585 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 CLSTN2Q9H4D0 955 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 ELAC1Q9H777 363 aaKnown RBP13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 SLC39A2Q9NP94 309 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 RNF19AQ9NV58 838 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 PCDHA5Q9Y5H7 936 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 UBE4BO95155 1302 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 CHD7Q9P2D1 2997 aa13.79□□□□□ -0.2
IGHV3-6-201ENST00000518407 ZNF623O75123 536 aa13.78□□□□□ -0.2
IGHV3-6-201ENST00000518407 PRPF6O94906 941 aaKnown RBP13.78□□□□□ -0.2
IGHV3-6-201ENST00000518407 RAB27AP51159 221 aa13.78□□□□□ -0.2
IGHV3-6-201ENST00000518407 MRPL10Q7Z7H8 261 aaKnown RBP13.78□□□□□ -0.2
IGHV3-6-201ENST00000518407 NPAS4Q8IUM7 802 aa13.78□□□□□ -0.2
IGHV3-6-201ENST00000518407 MYOCDQ8IZQ8 938 aa13.78□□□□□ -0.2
IGHV3-6-201ENST00000518407 ZNF507Q8TCN5 953 aa13.78□□□□□ -0.2
IGHV3-6-201ENST00000518407 SCFD1Q8WVM8 642 aa13.78□□□□□ -0.2
IGHV3-6-201ENST00000518407 GSDMAQ96QA5 445 aa13.78□□□□□ -0.2
IGHV3-6-201ENST00000518407 CDT1Q9H211 546 aa13.78□□□□□ -0.2
IGHV3-6-201ENST00000518407 TMEM161AQ9NX61 479 aa13.78□□□□□ -0.2
IGHV3-6-201ENST00000518407 HOOK1Q9UJC3 728 aaKnown RBP13.78□□□□□ -0.2
IGHV3-6-201ENST00000518407 PCDHB13Q9Y5F0 798 aa13.78□□□□□ -0.2
IGHV3-6-201ENST00000518407 MEIS3P2A8K0S8 358 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 TISP43B9A030 160 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 ANKRD63C9JTQ0 380 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 FAM189A1O60320 539 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 TOM1L1O75674 476 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 GJB5O95377 273 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 NPTXRO95502 500 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 MBD3O95983 291 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 ATP2A2P16615 1042 aaKnown RBP13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 HTRA4P83105 476 aaPredicted RBP13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 NCBP1Q09161 790 aaKnown RBP13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 DCAF4L1Q3SXM0 396 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 MPZL3Q6UWV2 235 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 HERC6Q8IVU3 1022 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 SMARCE1Q969G3 411 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 ZNF689Q96CS4 500 aaPredicted RBP13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 ZBTB45Q96K62 511 aaPredicted RBP13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 ACCSQ96QU6 501 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 NXF3Q9H4D5 531 aaKnown RBP13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 MAN1B1Q9UKM7 699 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 GDAQ9Y2T3 454 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 IPPQ9Y573 584 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 PCDHB2Q9Y5E7 798 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 STYXL1Q9Y6J8 313 aa13.77□□□□□ -0.21
IGHV3-6-201ENST00000518407 GRXCR1A8MXD5 290 aa13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 HNRNPDLO14979 420 aaKnown RBP13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 DGKIO75912 1065 aa13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 SMC2O95347 1197 aa13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 EOMESO95936 686 aa13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 SKIP12755 728 aa13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 LIG4P49917 911 aa13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 MCL1Q07820 350 aa13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 NOLC1Q14978 699 aaKnown RBP eCLIP13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 CAMK4Q16566 473 aa13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 LRIT3Q3SXY7 679 aa13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 ZNF568Q3ZCX4 644 aa13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 COBLL1Q53SF7 1204 aa13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 CLLU1OSQ5K130 101 aa13.76□□□□□ -0.21
IGHV3-6-201ENST00000518407 AGMOQ6ZNB7 445 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms