RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 SLFN12Q8IYM2 578 aa11.95□□□□□ -0.5
SPIDR-206ENST00000518074 GLT8D2Q9H1C3 349 aa11.95□□□□□ -0.5
SPIDR-206ENST00000518074 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.95□□□□□ -0.5
SPIDR-206ENST00000518074 MKI67P46013 3256 aaKnown RBP11.95□□□□□ -0.5
SPIDR-206ENST00000518074 CLIC2O15247 247 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 MYL3P08590 195 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 ICAM3P32942 547 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 MATR3P43243 847 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■■■■ 27.8
SPIDR-206ENST00000518074 GFPT1Q06210 699 aaPredicted RBP11.94□□□□□ -0.5
SPIDR-206ENST00000518074 PSMD2Q13200 908 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 MEA1Q16626 185 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 TCERG1LQ5VWI1 586 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 HAUS3Q68CZ6 603 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 MAEAQ7L5Y9 396 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 RETREG2Q8NC44 543 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 ERMNQ8TAM6 284 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 ETNPPLQ8TBG4 499 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 GDAP1L1Q96MZ0 367 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 REEP2Q9BRK0 252 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.94□□□□□ -0.5
SPIDR-206ENST00000518074 ANKZF1Q9H8Y5 726 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 PPME1Q9Y570 386 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 ARIH2O95376 493 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 MOCS3O95396 460 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 MYBP10242 640 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 EIF2AK2P19525 551 aaKnown RBP11.94□□□□□ -0.5
SPIDR-206ENST00000518074 CXCR5P32302 372 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 KIF11P52732 1056 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 KCNA1Q09470 495 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 AP3B2Q13367 1082 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 DCAF17Q5H9S7 520 aaPredicted RBP11.94□□□□□ -0.5
SPIDR-206ENST00000518074 KSR1Q8IVT5 923 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 PPTC7Q8NI37 304 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 CXorf38Q8TB03 319 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 LRCH3Q96II8 777 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 MMS19Q96T76 1030 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 SAR1BQ9Y6B6 198 aa11.94□□□□□ -0.5
SPIDR-206ENST00000518074 BUB1O43683 1085 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 ZRANB2O95218 330 aaKnown RBP eCLIP11.93□□□□□ -0.5
SPIDR-206ENST00000518074 MMP3P08254 477 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 SPATA31C1P0DKV0 1188 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 NR2F2P24468 414 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 KCNMA1Q12791 1236 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 LONRF2Q1L5Z9 754 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 RASIP1Q5U651 963 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 PSRC1Q6PGN9 363 aaPredicted RBP11.93□□□□□ -0.5
SPIDR-206ENST00000518074 SEPT14Q6ZU15 432 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 LENG9Q96B70 501 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 NAP1L4Q99733 375 aaKnown RBP11.93□□□□□ -0.5
SPIDR-206ENST00000518074 RUSC1Q9BVN2 902 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 PCDHA13Q9Y5I0 950 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 EIF3CLB5ME19 914 aaKnown RBP11.93□□□□□ -0.5
SPIDR-206ENST00000518074 GCNT3O95395 438 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 PFKMP08237 780 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 ACTN1P12814 892 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 RFC2P35250 354 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 GYS2P54840 703 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 SLC12A3P55017 1021 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 EHHADHQ08426 723 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 RAPGEF1Q13905 1077 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 DNAAF5Q86Y56 855 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 EIF3CQ99613 913 aaKnown RBP11.93□□□□□ -0.5
SPIDR-206ENST00000518074 IL23AQ9NPF7 189 aa11.93□□□□□ -0.5
SPIDR-206ENST00000518074 ERICH4A6NGS2 130 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 MAGEA1P43355 309 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 SPIRE1Q08AE8 756 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 GIT2Q14161 759 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 DGKDQ16760 1214 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 CCDC170Q8IYT3 715 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 KCNV2Q8TDN2 545 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 EIF2AK1Q9BQI3 630 aaKnown RBP11.92□□□□□ -0.5
SPIDR-206ENST00000518074 KATNAL1Q9BW62 490 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 SUDS3Q9H7L9 328 aaPredicted RBP11.92□□□□□ -0.5
SPIDR-206ENST00000518074 SMARCAL1Q9NZC9 954 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 MYH7BA7E2Y1 1941 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 CYP3A7-CYP3A51PA0A087WV96 503 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 CETN3O15182 167 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 NCK2O43639 380 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 B4GALT4O60513 344 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 TBCAO75347 108 aaKnown RBP11.92□□□□□ -0.5
SPIDR-206ENST00000518074 CYP3A7P24462 503 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 GUCY2CP25092 1073 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 SREBF1P36956 1147 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 VSNL1P62760 191 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 PTPROQ16827 1216 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 LY6KQ17RY6 165 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 WHAMMP3Q1A5X7 153 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 C11orf91Q3C1V1 193 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 C9orf50Q5SZB4 431 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 CELF3Q5SZQ8 465 aaKnown RBP11.92□□□□□ -0.5
SPIDR-206ENST00000518074 PCNX4Q63HM2 1172 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 ICE2Q659A1 982 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 RPUSD2Q8IZ73 545 aaKnown RBP11.92□□□□□ -0.5
SPIDR-206ENST00000518074 COPS5Q92905 334 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 SH2D3AQ9BRG2 576 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 HIPK3Q9H422 1215 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 ABCB6Q9NP58 842 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 CALCOCO1Q9P1Z2 691 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 MYO1AQ9UBC5 1043 aa11.92□□□□□ -0.5
SPIDR-206ENST00000518074 PLAGL2Q9UPG8 496 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms