RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 HDAC1Q13547 482 aaPredicted RBP11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 CASC1Q6TDU7 716 aa11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 TRMT1LQ7Z2T5 733 aaKnown RBP11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 ZNF410Q86VK4 478 aa11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 ZNF280BQ86YH2 543 aa11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 FGF14Q92915 247 aa11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 MYL10Q9BUA6 226 aa11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 GABBR1Q9UBS5 961 aa11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 CDH7Q9ULB5 785 aa11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 PIN4Q9Y237 131 aaKnown RBP11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 CCDC69A6NI79 296 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 E7EWF7 191 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 hCG_1984214I3L0E3 225 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 NR1I2O75469 434 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 OATP04181 439 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 FGFR4P22455 802 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 PMLP29590 882 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 DSG1Q02413 1049 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 CSRP2Q16527 193 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 IL31Q6EBC2 164 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 ZNF852Q6ZMS4 543 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 NFXL1Q6ZNB6 911 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 ZNF713Q8N859 430 aaPredicted RBP11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 ZNF577Q9BSK1 485 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 LNPKQ9C0E8 428 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 RSAD1Q9HA92 442 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 UBN1Q9NPG3 1134 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 SEMA4GQ9NTN9 838 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 FNIP2Q9P278 1114 aa11.09□□□□□ -0.63
SH2D4A-202ENST00000518040 DDHD2O94830 711 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 ADCY7P51828 1080 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 NAPAP54920 295 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 ADCY1Q08828 1119 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 PARM1Q6UWI2 310 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 PRR23CQ6ZRP0 262 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 RNF168Q8IYW5 571 aaPredicted RBP11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 ZNF668Q96K58 619 aaPredicted RBP11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 MTF2Q9Y483 593 aaPredicted RBP11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 SAMM50Q9Y512 469 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 PCDHB2Q9Y5E7 798 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 MYH15Q9Y2K3 1946 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 MTCL1Q9Y4B5 1905 aaKnown RBP11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 WDR64B1ANS9 1081 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 TGM5O43548 720 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 ZMYND10O75800 440 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 PROS1P07225 676 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 CYP3A4P08684 503 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 HNRNPA1P09651 372 aaKnown RBP eCLIP11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 CNR2P34972 360 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 LONRF3Q496Y0 759 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 CATSPER4Q7RTX7 472 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 MRPL10Q7Z7H8 261 aaKnown RBP11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 CNNM3Q8NE01 707 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 TMEM87BQ96K49 555 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 RPP25Q9BUL9 199 aaKnown RBP11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 PHF20Q9BVI0 1012 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 ZSWIM6Q9HCJ5 1215 aa11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 FAM217BQ9NTX9 383 aaPredicted RBP11.08□□□□□ -0.64
SH2D4A-202ENST00000518040 IGLV3-22A0A075B6J6 115 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 MEIS3P2A8K0S8 358 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 FAM86B1E9PN63 330 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 B4GALT3O60512 393 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 EFEMP2O95967 443 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 FAM86B2P0C5J1 330 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 TARSP26639 723 aaKnown RBP11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 LIMK1P53667 647 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 ANTXR2P58335 489 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 LILRA6Q6PI73 481 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 TSSK4Q6SA08 328 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 AGMOQ6ZNB7 445 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 PALB2Q86YC2 1186 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 PLEKHM2Q8IWE5 1019 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 MB21D2Q8IYB1 491 aaPredicted RBP11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 CMTR1Q8N1G2 835 aaKnown RBP11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 RUFY2Q8WXA3 655 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 PGBD1Q96JS3 809 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 KRTAP3-3Q9BYR6 98 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 KRTAP3-2Q9BYR7 98 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 CHST7Q9NS84 486 aa11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 RALYQ9UKM9 306 aaKnown RBP11.07□□□□□ -0.64
SH2D4A-202ENST00000518040 A0A087WZ62 844 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 MAN2B1O00754 1011 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 CSDE1O75534 798 aaKnown RBP11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 SPATA31D3P0C874 917 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 HOXA9P31269 272 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 LIFRP42702 1097 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 OR1G1P47890 313 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 CCR3P51677 355 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 PRKCEQ02156 737 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 MTAPQ13126 283 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 MMRN1Q13201 1228 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 USP41Q3LFD5 358 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 WWC2Q6AWC2 1192 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 PRR23BQ6ZRT6 265 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 SPATA31D4Q6ZUB0 917 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 TPRG1Q6ZUI0 275 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 TMTC3Q6ZXV5 915 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 FANCBQ8NB91 859 aa11.06□□□□□ -0.64
SH2D4A-202ENST00000518040 FGF13Q92913 245 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms