RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 FCRL3Q96P31 734 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-204ENST00000517862 MPHOSPH9Q99550 1183 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 LACRTQ9GZZ8 138 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 CCDC113Q9H0I3 377 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 CLEC4MQ9H2X3 399 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-204ENST00000517862 PRORYQ9H606 182 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 TBC1D17Q9HA65 648 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 SPC25Q9HBM1 224 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 LRRC4CQ9HCJ2 640 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 PICK1Q9NRD5 415 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 FRRS1LQ9P0K9 344 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 MAN2B2Q9Y2E5 1009 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 POLR3KQ9Y2Y1 108 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-204ENST00000517862 PATJQ8NI35 1801 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 GRIN2DO15399 1336 aa4.13□□□□□ -1.75
CPNE3-204ENST00000517862 ZNF236Q9UL36 1845 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 TEX51A0A1B0GUA7 166 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 MEGF11A6BM72 1044 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 SLC15A5A6NIM6 579 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 C2CD4DB7Z1M9 353 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 FYB1O15117 783 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 DDAH1O94760 285 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 BAIAP3O94812 1187 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 BPNT1O95861 308 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 NME2P22392 152 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 ZNF165P49910 485 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 GYS2P54840 703 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 WDR5P61964 334 aaKnown RBP4.12□□□□□ -1.75
CPNE3-204ENST00000517862 DEFB103AP81534 67 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 AMPD3Q01432 767 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 PPP2R3AQ06190 1150 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 RASGRF1Q13972 1273 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 ZNF423Q2M1K9 1284 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 RPS26P11Q5JNZ5 115 aaPredicted RBP4.12□□□□□ -1.75
CPNE3-204ENST00000517862 MRM1Q6IN84 353 aaKnown RBP4.12□□□□□ -1.75
CPNE3-204ENST00000517862 LLGL2Q6P1M3 1020 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.12□□□□□ -1.75
CPNE3-204ENST00000517862 HOMER1Q86YM7 354 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 CELF5Q8N6W0 485 aaKnown RBP4.12□□□□□ -1.75
CPNE3-204ENST00000517862 EFHBQ8N7U6 833 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 LPIN3Q9BQK8 851 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 MYL10Q9BUA6 226 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 SEMA4CQ9C0C4 833 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 SLKQ9H2G2 1235 aaPredicted RBP4.12□□□□□ -1.75
CPNE3-204ENST00000517862 ACSS3Q9H6R3 686 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 ZFYVE1Q9HBF4 777 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 ZNF112Q9UJU3 913 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 TRIM33Q9UPN9 1127 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 CSMD1Q96PZ7 3565 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 MED23Q9ULK4 1368 aa4.12□□□□□ -1.75
CPNE3-204ENST00000517862 PCNX2A6NKB5 2137 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 SHISA7A6NL88 538 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 HTATSF1O43719 755 aaKnown RBP4.11□□□□□ -1.75
CPNE3-204ENST00000517862 PARNO95453 639 aaKnown RBP4.11□□□□□ -1.75
CPNE3-204ENST00000517862 B3GALT4O96024 378 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 SRFP11831 508 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 GLULP15104 373 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 PTPRAP18433 802 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 CDC25BP30305 580 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 CACNB3P54284 484 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 ERVK-24P63145 666 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 IRX3P78415 501 aaPredicted RBP4.11□□□□□ -1.75
CPNE3-204ENST00000517862 FXNQ16595 210 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 MLANAQ16655 118 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 PLEKHG6Q3KR16 790 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 C2orf27AQ580R0 203 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 OLFML2BQ68BL8 750 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 HGSNATQ68CP4 663 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 TTLL7Q6ZT98 887 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 LRP10Q7Z4F1 713 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 VN1R5Q7Z5H4 357 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 KIAA0907Q7Z7F0 614 aaPredicted RBP4.11□□□□□ -1.75
CPNE3-204ENST00000517862 TICAM1Q8IUC6 712 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 MAP4K3Q8IVH8 894 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 FAM20CQ8IXL6 584 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 TMEM192Q8IY95 271 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 STAG1Q8WVM7 1258 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 BSNDQ8WZ55 320 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 NELL1Q92832 810 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 PPP2R3CQ969Q6 453 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 FAM46AQ96IP4 442 aaKnown RBP4.11□□□□□ -1.75
CPNE3-204ENST00000517862 FAM126AQ9BYI3 521 aaPredicted RBP4.11□□□□□ -1.75
CPNE3-204ENST00000517862 TMEM260Q9NX78 707 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 PLEKHB1Q9UF11 243 aaPredicted RBP4.11□□□□□ -1.75
CPNE3-204ENST00000517862 G3BP2Q9UN86 482 aaKnown RBP4.11□□□□□ -1.75
CPNE3-204ENST00000517862 NBASA2RRP1 2371 aa4.11□□□□□ -1.75
CPNE3-204ENST00000517862 DOCK8Q8NF50 2099 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 UPK3BL1B0FP48 263 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 UPK3BL2E5RIL1 263 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 F5H6K3 240 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 PPP1R12AO14974 1030 aaPredicted RBP4.1□□□□□ -1.75
CPNE3-204ENST00000517862 SMNDC1O75940 238 aaKnown RBP eCLIP4.1□□□□□ -1.75
CPNE3-204ENST00000517862 ASMTLO95671 621 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 ECEL1O95672 775 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 ASGR1P07306 291 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 EPHA1P21709 976 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 ARNTP27540 789 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 RDXP35241 583 aaKnown RBP4.1□□□□□ -1.75
CPNE3-204ENST00000517862 RFC2P35250 354 aa4.1□□□□□ -1.75
CPNE3-204ENST00000517862 IL12RB1P42701 662 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms