RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 TCP1P17987 556 aaKnown RBP28.77■■■□□ 2.2
COL13A1-210ENST00000517713 FBXO16Q8IX29 292 aaPredicted RBP28.77■■■□□ 2.2
COL13A1-210ENST00000517713 LNX1Q8TBB1 728 aaPredicted RBP28.77■■■□□ 2.2
COL13A1-210ENST00000517713 U2AF1L4Q8WU68 220 aaKnown RBP28.77■■■□□ 2.2
COL13A1-210ENST00000517713 FAM167AQ96KS9 214 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 OSBPL9Q96SU4 736 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 POP1Q99575 1024 aaKnown RBP28.77■■■□□ 2.2
COL13A1-210ENST00000517713 EFCC1Q9HA90 598 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 LOC102724159A0A0B4J2E5 919 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 ENPEPQ07075 957 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 KIF22Q14807 665 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 PWP2Q15269 919 aaKnown RBP28.76■■■□□ 2.19
COL13A1-210ENST00000517713 HSDL1Q3SXM5 330 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 OLIG1Q8TAK6 271 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 FAM213AQ9BRX8 229 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 SYT11Q9BT88 431 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 TLR10Q9BXR5 811 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 TSKSQ9UJT2 592 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 INTUQ9ULD6 942 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 ZNFX1Q9P2E3 1918 aaKnown RBP28.76■■■□□ 2.19
COL13A1-210ENST00000517713 K7ERI5 159 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 NOP56O00567 594 aaKnown RBP28.76■■■□□ 2.19
COL13A1-210ENST00000517713 NCK2O43639 380 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 GTF2H1P32780 548 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 NFRKBQ6P4R8 1299 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 GPRC5AQ8NFJ5 357 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 GLG1Q92896 1179 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 PPME1Q9Y570 386 aa28.76■■■□□ 2.19
COL13A1-210ENST00000517713 MAFO75444 373 aaPredicted RBP28.75■■■□□ 2.19
COL13A1-210ENST00000517713 LGR5O75473 907 aa28.75■■■□□ 2.19
COL13A1-210ENST00000517713 H2AFZP0C0S5 128 aa28.75■■■□□ 2.19
COL13A1-210ENST00000517713 RHOXF2BP0C7M4 288 aa28.75■■■□□ 2.19
COL13A1-210ENST00000517713 CETPP11597 493 aa28.75■■■□□ 2.19
COL13A1-210ENST00000517713 CCDC62Q6P9F0 684 aa28.75■■■□□ 2.19
COL13A1-210ENST00000517713 H2AFVQ71UI9 128 aa28.75■■■□□ 2.19
COL13A1-210ENST00000517713 CREG2Q8IUH2 290 aa28.75■■■□□ 2.19
COL13A1-210ENST00000517713 GLYCTKQ8IVS8 523 aa28.75■■■□□ 2.19
COL13A1-210ENST00000517713 DHX37Q8IY37 1157 aaKnown RBP28.75■■■□□ 2.19
COL13A1-210ENST00000517713 BBXQ8WY36 941 aaPredicted RBP28.75■■■□□ 2.19
COL13A1-210ENST00000517713 RHOXF2Q9BQY4 288 aa28.75■■■□□ 2.19
COL13A1-210ENST00000517713 KIAA1586Q9HCI6 787 aa28.75■■■□□ 2.19
COL13A1-210ENST00000517713 COQ4Q9Y3A0 265 aa28.75■■■□□ 2.19
COL13A1-210ENST00000517713 ZNF233A6NK53 670 aa28.74■■■□□ 2.19
COL13A1-210ENST00000517713 PDE2AO00408 941 aaPredicted RBP28.74■■■□□ 2.19
COL13A1-210ENST00000517713 DNAAF5Q86Y56 855 aa28.74■■■□□ 2.19
COL13A1-210ENST00000517713 COG1Q8WTW3 980 aa28.74■■■□□ 2.19
COL13A1-210ENST00000517713 SEMA4DQ92854 862 aa28.74■■■□□ 2.19
COL13A1-210ENST00000517713 STYXL1Q9Y6J8 313 aa28.74■■■□□ 2.19
COL13A1-210ENST00000517713 ASB14A6NK59 587 aa28.74■■■□□ 2.19
COL13A1-210ENST00000517713 PDHXO00330 501 aa28.74■■■□□ 2.19
COL13A1-210ENST00000517713 EXTL3O43909 919 aa28.74■■■□□ 2.19
COL13A1-210ENST00000517713 CCNA1P78396 465 aa28.74■■■□□ 2.19
COL13A1-210ENST00000517713 MS4A4AQ96JQ5 239 aa28.74■■■□□ 2.19
COL13A1-210ENST00000517713 SPATA33Q96N06 139 aa28.74■■■□□ 2.19
COL13A1-210ENST00000517713 SIP14410 1827 aa28.73■■■□□ 2.19
COL13A1-210ENST00000517713 PIGRP01833 764 aa28.73■■■□□ 2.19
COL13A1-210ENST00000517713 IFI16Q16666 785 aaKnown RBP28.73■■■□□ 2.19
COL13A1-210ENST00000517713 PLPPR4Q7Z2D5 763 aa28.73■■■□□ 2.19
COL13A1-210ENST00000517713 TOPORSQ9NS56 1045 aaPredicted RBP28.73■■■□□ 2.19
COL13A1-210ENST00000517713 SLC45A1Q9Y2W3 748 aa28.73■■■□□ 2.19
COL13A1-210ENST00000517713 GRID2IPA4D2P6 1211 aa28.72■■■□□ 2.19
COL13A1-210ENST00000517713 KIAA0391O15091 583 aaKnown RBP28.72■■■□□ 2.19
COL13A1-210ENST00000517713 TXNP10599 105 aaKnown RBP28.72■■■□□ 2.19
COL13A1-210ENST00000517713 TNFAIP3P21580 790 aa28.72■■■□□ 2.19
COL13A1-210ENST00000517713 MARK3P27448 753 aa28.72■■■□□ 2.19
COL13A1-210ENST00000517713 GTF2A2P52657 109 aa28.72■■■□□ 2.19
COL13A1-210ENST00000517713 BRD3Q15059 726 aa28.72■■■□□ 2.19
COL13A1-210ENST00000517713 PNKPQ96T60 521 aa28.72■■■□□ 2.19
COL13A1-210ENST00000517713 TMEM134Q9H6X4 195 aa28.72■■■□□ 2.19
COL13A1-210ENST00000517713 RAB21Q9UL25 225 aa28.72■■■□□ 2.19
COL13A1-210ENST00000517713 DLATP10515 647 aaKnown RBP28.72■■■□□ 2.19
COL13A1-210ENST00000517713 NOP2P46087 812 aaKnown RBP28.72■■■□□ 2.19
COL13A1-210ENST00000517713 GPC3P51654 580 aa28.72■■■□□ 2.19
COL13A1-210ENST00000517713 CAPSQ13938 189 aa28.72■■■□□ 2.19
COL13A1-210ENST00000517713 SLFN12LQ6IEE8 588 aa28.72■■■□□ 2.19
COL13A1-210ENST00000517713 CC2D1AQ6P1N0 951 aaPredicted RBP28.72■■■□□ 2.19
COL13A1-210ENST00000517713 FBXL13Q8NEE6 735 aa28.72■■■□□ 2.19
COL13A1-210ENST00000517713 SPDYE4A6NLX3 237 aa28.71■■■□□ 2.19
COL13A1-210ENST00000517713 BTBD19C9JJ37 291 aa28.71■■■□□ 2.19
COL13A1-210ENST00000517713 ZRANB2O95218 330 aaKnown RBP eCLIP28.71■■■□□ 2.19
COL13A1-210ENST00000517713 FTCDO95954 541 aa28.71■■■□□ 2.19
COL13A1-210ENST00000517713 MEI1Q5TIA1 1274 aa28.71■■■□□ 2.19
COL13A1-210ENST00000517713 TRIM50Q86XT4 487 aa28.71■■■□□ 2.19
COL13A1-210ENST00000517713 PSPC1Q8WXF1 523 aaKnown RBP28.71■■■□□ 2.19
COL13A1-210ENST00000517713 COPS5Q92905 334 aa28.71■■■□□ 2.19
COL13A1-210ENST00000517713 PSMB7Q99436 277 aa28.71■■■□□ 2.19
COL13A1-210ENST00000517713 OGFRQ9NZT2 677 aa28.71■■■□□ 2.19
COL13A1-210ENST00000517713 AGO2Q9UKV8 859 aaKnown RBP28.71■■■□□ 2.19
COL13A1-210ENST00000517713 A0A0A6YYK5 440 aaPredicted RBP28.7■■■□□ 2.19
COL13A1-210ENST00000517713 CCL15-CCL14A0A0B4J2E2 113 aa28.7■■■□□ 2.19
COL13A1-210ENST00000517713 CCDC151A5D8V7 595 aa28.7■■■□□ 2.19
COL13A1-210ENST00000517713 CXCR5P32302 372 aa28.7■■■□□ 2.19
COL13A1-210ENST00000517713 MFAP3P55082 362 aa28.7■■■□□ 2.19
COL13A1-210ENST00000517713 MKRN3Q13064 507 aaKnown RBP28.7■■■□□ 2.19
COL13A1-210ENST00000517713 TTLL4Q14679 1199 aa28.7■■■□□ 2.19
COL13A1-210ENST00000517713 CCL15Q16663 113 aa28.7■■■□□ 2.19
COL13A1-210ENST00000517713 SV2AQ7L0J3 742 aa28.7■■■□□ 2.19
COL13A1-210ENST00000517713 ZNF572Q7Z3I7 529 aaPredicted RBP28.7■■■□□ 2.19
COL13A1-210ENST00000517713 PPM1KQ8N3J5 372 aa28.7■■■□□ 2.19
COL13A1-210ENST00000517713 ATP8B4Q8TF62 1192 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms