RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 PBX3P40426 434 aa27.18■■□□□ 1.94
PVT1-204ENST00000517525 UBA7P41226 1012 aa27.18■■□□□ 1.94
PVT1-204ENST00000517525 SLC12A3P55017 1021 aa27.18■■□□□ 1.94
PVT1-204ENST00000517525 RNASELQ05823 741 aaKnown RBP27.18■■□□□ 1.94
PVT1-204ENST00000517525 ADGRD2Q7Z7M1 963 aa27.18■■□□□ 1.94
PVT1-204ENST00000517525 CABP7Q86V35 215 aa27.18■■□□□ 1.94
PVT1-204ENST00000517525 IGSF21Q96ID5 467 aa27.18■■□□□ 1.94
PVT1-204ENST00000517525 TRIM6Q9C030 488 aaPredicted RBP27.18■■□□□ 1.94
PVT1-204ENST00000517525 PLXNA4Q9HCM2 1894 aa27.18■■□□□ 1.94
PVT1-204ENST00000517525 STX6O43752 255 aa27.17■■□□□ 1.94
PVT1-204ENST00000517525 HIP1RO75146 1068 aa27.17■■□□□ 1.94
PVT1-204ENST00000517525 ZC3H11AO75152 810 aaKnown RBP eCLIP27.17■■□□□ 1.94
PVT1-204ENST00000517525 AFF1P51825 1210 aaKnown RBP27.17■■□□□ 1.94
PVT1-204ENST00000517525 PRPF4BQ13523 1007 aaKnown RBP27.17■■□□□ 1.94
PVT1-204ENST00000517525 ZNF280BQ86YH2 543 aa27.17■■□□□ 1.94
PVT1-204ENST00000517525 MICAL1Q8TDZ2 1067 aa27.17■■□□□ 1.94
PVT1-204ENST00000517525 TMEM169Q96HH4 297 aa27.17■■□□□ 1.94
PVT1-204ENST00000517525 CDK5RAP3Q96JB5 506 aa27.17■■□□□ 1.94
PVT1-204ENST00000517525 PDZD7Q9H5P4 517 aa27.17■■□□□ 1.94
PVT1-204ENST00000517525 TMEM134Q9H6X4 195 aa27.17■■□□□ 1.94
PVT1-204ENST00000517525 ARHGAP28Q9P2N2 729 aa27.17■■□□□ 1.94
PVT1-204ENST00000517525 RBM19Q9Y4C8 960 aaKnown RBP27.17■■□□□ 1.94
PVT1-204ENST00000517525 GRXCR2A6NFK2 248 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 ARL5CA6NH57 179 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 DDHD2O94830 711 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 PLA2G4BP0C869 781 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 GTF2F1P35269 517 aaKnown RBP eCLIP27.16■■□□□ 1.943e-6■■□□□ 13.2
PVT1-204ENST00000517525 NPTX2P47972 431 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 DSC1Q08554 894 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 DUSP6Q16828 381 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 DDX53Q86TM3 631 aaKnown RBP27.16■■□□□ 1.94
PVT1-204ENST00000517525 SPIRE2Q8WWL2 714 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 KCNN1Q92952 543 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 CALML4Q96GE6 196 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 GAD1Q99259 594 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 TCF25Q9BQ70 676 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 CCSER1Q9C0I3 900 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 NXF3Q9H4D5 531 aaKnown RBP27.16■■□□□ 1.94
PVT1-204ENST00000517525 TLE6Q9H808 572 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 HES2Q9Y543 173 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 CLIC4Q9Y696 253 aa27.16■■□□□ 1.94
PVT1-204ENST00000517525 TTLL13PA6NNM8 815 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 B4GALT3O60512 393 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 NPTXRO95502 500 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 ALDH2P05091 517 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 NRIP1P48552 1158 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 SLC11A1P49279 550 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 DMP1Q13316 513 aaPredicted RBP27.15■■□□□ 1.94
PVT1-204ENST00000517525 TMEM184AQ6ZMB5 413 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 HSCBQ8IWL3 235 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 GSTCDQ8NEC7 633 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 POLD4Q9HCU8 107 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 DNAJB4Q9UDY4 337 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 PCDHGC5Q9Y5F6 944 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 SRPRBQ9Y5M8 271 aaKnown RBP27.15■■□□□ 1.94
PVT1-204ENST00000517525 IRAK3Q9Y616 596 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 XIRP2A4UGR9 3374 aa27.15■■□□□ 1.94
PVT1-204ENST00000517525 NT5C1B-RDH14C9J2C7 533 aa27.14■■□□□ 1.94
PVT1-204ENST00000517525 H3BQ06 376 aaPredicted RBP27.14■■□□□ 1.94
PVT1-204ENST00000517525 K7ERI5 159 aa27.14■■□□□ 1.94
PVT1-204ENST00000517525 TNFRSF10AO00220 468 aa27.14■■□□□ 1.94
PVT1-204ENST00000517525 PEX3P56589 373 aa27.14■■□□□ 1.94
PVT1-204ENST00000517525 GRIN1Q05586 938 aa27.14■■□□□ 1.94
PVT1-204ENST00000517525 KCNC3Q14003 757 aa27.14■■□□□ 1.94
PVT1-204ENST00000517525 ZRSR1Q15695 479 aaKnown RBP27.14■■□□□ 1.94
PVT1-204ENST00000517525 PTCRAQ6ISU1 281 aaPredicted RBP27.14■■□□□ 1.94
PVT1-204ENST00000517525 TMEM173Q86WV6 379 aaPredicted RBP27.14■■□□□ 1.94
PVT1-204ENST00000517525 COLGALT2Q8IYK4 626 aa27.14■■□□□ 1.94
PVT1-204ENST00000517525 MRPL43Q8N983 215 aaKnown RBP27.14■■□□□ 1.94
PVT1-204ENST00000517525 MSLNLQ96KJ4 702 aa27.14■■□□□ 1.94
PVT1-204ENST00000517525 KIFC3Q9BVG8 833 aa27.14■■□□□ 1.94
PVT1-204ENST00000517525 IGFLR1Q9H665 355 aa27.14■■□□□ 1.94
PVT1-204ENST00000517525 FAM50BQ9Y247 325 aa27.14■■□□□ 1.94
PVT1-204ENST00000517525 TBX10O75333 385 aa27.13■■□□□ 1.93
PVT1-204ENST00000517525 EDN1P05305 212 aa27.13■■□□□ 1.93
PVT1-204ENST00000517525 MLH1P40692 756 aa27.13■■□□□ 1.93
PVT1-204ENST00000517525 DLX2Q07687 328 aaPredicted RBP27.13■■□□□ 1.93
PVT1-204ENST00000517525 SMC1AQ14683 1233 aaKnown RBP27.13■■□□□ 1.93
PVT1-204ENST00000517525 BMS1Q14692 1282 aaKnown RBP27.13■■□□□ 1.93
PVT1-204ENST00000517525 NT5DC1Q5TFE4 455 aa27.13■■□□□ 1.93
PVT1-204ENST00000517525 TMC7Q7Z402 723 aa27.13■■□□□ 1.93
PVT1-204ENST00000517525 CDR2LQ86X02 465 aaPredicted RBP27.13■■□□□ 1.93
PVT1-204ENST00000517525 FAM193BQ96PV7 902 aaPredicted RBP27.13■■□□□ 1.93
PVT1-204ENST00000517525 ADPGKQ9BRR6 497 aa27.13■■□□□ 1.93
PVT1-204ENST00000517525 ENTPD7Q9NQZ7 604 aa27.13■■□□□ 1.93
PVT1-204ENST00000517525 BLOC1S4Q9NUP1 217 aa27.13■■□□□ 1.93
PVT1-204ENST00000517525 MIOSQ9NXC5 875 aa27.13■■□□□ 1.93
PVT1-204ENST00000517525 FBXO2Q9UK22 296 aaPredicted RBP27.13■■□□□ 1.93
PVT1-204ENST00000517525 TNFSF13BQ9Y275 285 aa27.13■■□□□ 1.93
PVT1-204ENST00000517525 LINC01565O15544 149 aa27.12■■□□□ 1.93
PVT1-204ENST00000517525 POMCP01189 267 aa27.12■■□□□ 1.93
PVT1-204ENST00000517525 PLS3P13797 630 aa27.12■■□□□ 1.93
PVT1-204ENST00000517525 COASYQ13057 564 aa27.12■■□□□ 1.93
PVT1-204ENST00000517525 GIT2Q14161 759 aa27.12■■□□□ 1.93
PVT1-204ENST00000517525 DCAF4L1Q3SXM0 396 aa27.12■■□□□ 1.93
PVT1-204ENST00000517525 ARSHQ5FYA8 562 aa27.12■■□□□ 1.93
PVT1-204ENST00000517525 BCL7CQ8WUZ0 217 aaPredicted RBP27.12■■□□□ 1.93
PVT1-204ENST00000517525 ZFP42Q96MM3 310 aa27.12■■□□□ 1.93
PVT1-204ENST00000517525 PLIN2Q99541 437 aa27.12■■□□□ 1.93
PVT1-204ENST00000517525 ZBP1Q9H171 429 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms