RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 FPGSQ05932 587 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 PRPF4BQ13523 1007 aaKnown RBP10.85□□□□□ -0.67
CLN8-202ENST00000517514 ALCAMQ13740 583 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 PCBP1Q15365 356 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLN8-202ENST00000517514 DPCR1Q3MIW9 517 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 CNKSR3Q6P9H4 555 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 ZPBP2Q6X784 338 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLN8-202ENST00000517514 TRIML1Q8N9V2 468 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 SLC17A8Q8NDX2 589 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 CCDC34Q96HJ3 373 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 ACCSQ96QU6 501 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 GDF15Q99988 308 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLN8-202ENST00000517514 MRPL4Q9BYD3 311 aaKnown RBP10.85□□□□□ -0.67
CLN8-202ENST00000517514 CDT1Q9H211 546 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 TSPYL2Q9H2G4 693 aaPredicted RBP10.85□□□□□ -0.67
CLN8-202ENST00000517514 RMND1Q9NWS8 449 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 PRKAG2Q9UGJ0 569 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 KCNG1Q9UIX4 513 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 TNFSF13BQ9Y275 285 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 STYXL1Q9Y6J8 313 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 CITO14578 2027 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 UBE4BO95155 1302 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 MEIS3P2A8K0S8 358 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 C9IYK1 514 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 H0YCG3 227 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 SCP2P22307 547 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 AXLP30530 894 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 PPIGQ13427 754 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLN8-202ENST00000517514 KNOP1Q1ED39 458 aaKnown RBP10.84□□□□□ -0.67
CLN8-202ENST00000517514 ZSCAN23Q3MJ62 389 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 ZBTB41Q5SVQ8 909 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 C9orf50Q5SZB4 431 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 ATF7IP2Q5U623 682 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 RASIP1Q5U651 963 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 ZNF365Q70YC5 407 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 ZNF598Q86UK7 904 aaKnown RBP10.84□□□□□ -0.67
CLN8-202ENST00000517514 TMEM192Q8IY95 271 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 MYOCDQ8IZQ8 938 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 CEP120Q8N960 986 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 SMG8Q8ND04 991 aaKnown RBP10.84□□□□□ -0.67
CLN8-202ENST00000517514 SEPT8Q92599 483 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 ADAM2Q99965 735 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 TRAIPQ9BWF2 469 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 CXCL16Q9H2A7 254 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 CHST12Q9NRB3 414 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 RGS18Q9NS28 235 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 RNF19AQ9NV58 838 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 CXXC1Q9P0U4 656 aaPredicted RBP10.84□□□□□ -0.67
CLN8-202ENST00000517514 PIN4Q9Y237 131 aaKnown RBP10.84□□□□□ -0.67
CLN8-202ENST00000517514 NR2E3Q9Y5X4 410 aa10.84□□□□□ -0.67
CLN8-202ENST00000517514 A0A0B4J269 797 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 SYCE3A1L190 88 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 TRIM49BA6NDI0 452 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 CLIC2O15247 247 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 TOM1L1O75674 476 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 ERLIN2O94905 339 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 NPTXRO95502 500 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 WNT7BP56706 349 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 DEFB103AP81534 67 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 MCL1Q07820 350 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 STRN3Q13033 797 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 SEZ6Q53EL9 994 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 CENPPQ6IPU0 288 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 CRELD2Q6UXH1 353 aaPredicted RBP10.83□□□□□ -0.68
CLN8-202ENST00000517514 C11orf57Q6ZUT1 292 aaPredicted RBP10.83□□□□□ -0.68
CLN8-202ENST00000517514 MRPL10Q7Z7H8 261 aaKnown RBP10.83□□□□□ -0.68
CLN8-202ENST00000517514 ZBTB33Q86T24 672 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 ZC3H3Q8IXZ2 948 aaKnown RBP10.83□□□□□ -0.68
CLN8-202ENST00000517514 RPUSD2Q8IZ73 545 aaKnown RBP10.83□□□□□ -0.68
CLN8-202ENST00000517514 APBB2Q92870 758 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 CCDC47Q96A33 483 aaKnown RBP10.83□□□□□ -0.68
CLN8-202ENST00000517514 DUSP9Q99956 384 aaKnown RBP10.83□□□□□ -0.68
CLN8-202ENST00000517514 CBWD1Q9BRT8 395 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 RNF39Q9H2S5 420 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 PRO3102Q9H379 93 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 AGPAT3Q9NRZ7 376 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 DMAC2Q9NW81 257 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 KIAA1671Q9BY89 1806 aa10.83□□□□□ -0.68
CLN8-202ENST00000517514 TDRD15B5MCY1 1934 aaKnown RBP10.82□□□□□ -0.68
CLN8-202ENST00000517514 A0A0U1RQF3 1178 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 ABHD14A-ACY1A0A1B0GW23 586 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 HNRNPDLO14979 420 aaKnown RBP10.82□□□□□ -0.68
CLN8-202ENST00000517514 N4BP3O15049 544 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 ZNF623O75123 536 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 FGBP02675 491 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 PFKMP08237 780 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 CCNE1P24864 410 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 ABCD1P33897 745 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 LIG4P49917 911 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 WDR5P61964 334 aaKnown RBP10.82□□□□□ -0.68
CLN8-202ENST00000517514 TYRO3Q06418 890 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 SHHQ15465 462 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 ANKRD40Q6AI12 368 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 TTI2Q6NXR4 508 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 NOTUMQ6P988 496 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 SLC27A1Q6PCB7 646 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 MPZL3Q6UWV2 235 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 AGMOQ6ZNB7 445 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms