RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 LMNTD2Q8IXW0 634 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 BBOF1Q8ND07 529 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 SAAL1Q96ER3 474 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 AP5M1Q9H0R1 490 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 FSBPO95073 299 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 ACSL3O95573 720 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 INHBAP08476 426 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 CDO1Q16878 200 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 C4orf32Q8N8J7 132 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 CALR3Q96L12 384 aaKnown RBP11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 LXNQ9BS40 222 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 GABBR1Q9UBS5 961 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 SCN11AQ9UI33 1791 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 C5P01031 1676 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 WTIPA6NIX2 430 aaPredicted RBP11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 HSPA6P17066 643 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 TNFRSF8P28908 595 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 QARSP47897 775 aaKnown RBP11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 ERVK-9P63128 1117 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 LMNB2Q03252 620 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 STXBP2Q15833 593 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 RINT1Q6NUQ1 792 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 NSUN6Q8TEA1 469 aaKnown RBP11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 RAB3IPQ96QF0 476 aaPredicted RBP11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 IL17RBQ9NRM6 502 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 ANAPC7Q9UJX3 599 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 DIS3Q9Y2L1 958 aaKnown RBP11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 CCDC38Q502W7 563 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 FRMD5Q7Z6J6 570 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 SGSM3Q96HU1 749 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 EIF2AK1Q9BQI3 630 aaKnown RBP11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 SNX25Q9H3E2 840 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 MLXIPLQ9NP71 852 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 NGRNQ9NPE2 291 aaKnown RBP11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 GALCP54803 685 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 LRRC14Q15048 493 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 PDZD4Q76G19 769 aaPredicted RBP11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 CYFIP1Q7L576 1253 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 SPATA24Q86W54 205 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 LDHDQ86WU2 507 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 DCLK2Q8N568 766 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 PURBQ96QR8 312 aaKnown RBP11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 SH3GL2Q99962 352 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 TBC1D22BQ9NU19 505 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 HOXC10Q9NYD6 342 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 ADAM22Q9P0K1 906 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 DDX20Q9UHI6 824 aaKnown RBP11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 GGT7Q9UJ14 662 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 FEM1BQ9UK73 627 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 ARHGAP42A6NI28 874 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 P4HBP07237 508 aaKnown RBP11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 ZNF543Q08ER8 600 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 BYSLQ13895 437 aaKnown RBP11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 NPY5RQ15761 445 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 NXNQ6DKJ4 435 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 KCTD6Q8NC69 237 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 LRRC8CQ8TDW0 803 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 RFFLQ8WZ73 363 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 PRMT1Q99873 361 aaKnown RBP11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 TTYH3Q9C0H2 523 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 RPF1Q9H9Y2 349 aaKnown RBP11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 SMYD2Q9NRG4 433 aa11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 CNOT8Q9UFF9 292 aaKnown RBP11.57□□□□□ -0.56
PCDHGA1-202ENST00000517417 TXNDC9O14530 226 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 XPOTO43592 962 aaKnown RBP11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 CSPG5O95196 566 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 NDUFB10O96000 172 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 NMT1P30419 496 aaKnown RBP11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 DRAP1Q14919 205 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 TMEM270Q6UE05 265 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 MCPH1Q8NEM0 835 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 TPCN2Q8NHX9 752 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 NOP53Q9NZM5 478 aaKnown RBP11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 ARFGEF2Q9Y6D5 1785 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 PDHBP11177 359 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 FGFR4P22455 802 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 COPB2P35606 906 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 RWDD2BP57060 319 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 BBS9Q3SYG4 887 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 CEP55Q53EZ4 464 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 ERICH1Q86X53 443 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 KAT2BQ92831 832 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 SHISA4Q96DD7 197 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 ZWILCHQ9H900 591 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 NAGPAQ9UK23 515 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 MYO3BQ8WXR4 1341 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 SYNGAP1Q96PV0 1343 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 FAM187AA6NFU0 413 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 CYTH3O43739 400 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 KIF1CO43896 1103 aaKnown RBP11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 HNRNPH3P31942 346 aaKnown RBP11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 SCTRP47872 440 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 JAK3P52333 1124 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 DARS2Q6PI48 645 aaKnown RBP11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 ARHGAP24Q8N264 748 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 DNAAF3Q8N9W5 541 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 SLC35G2Q8TBE7 412 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 PPP4R1Q8TF05 950 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 SCYL1Q96KG9 808 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 PNMA5Q96PV4 448 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms