RNA–Protein interactions for RNA: ENST00000517052.1

RNU6-448P-201, Transcript of RNA, U6 small nuclear 448, pseudogene, humanhuman

BASIC

Gene RNU6-448P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-448P-201ENST00000517052 PPP1R1BQ9UD71 204 aaPredicted RBP1.17□□□□□ -2.22
RNU6-448P-201ENST00000517052 DNAI1Q9UI46 699 aa1.17□□□□□ -2.22
RNU6-448P-201ENST00000517052 CCDC163A0A0D9SF12 145 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 GAGE12BA1L429 117 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 PIPSLA2A3N6 862 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 GAGE12HA6NDE8 117 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 E9PSI1 815 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 M0R2C6 588 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 NRP1O14786 923 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 HOXA3O43365 443 aaPredicted RBP1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 DNAJC6O75061 913 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 RBMXL2O75526 392 aaKnown RBP1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 GLRX3O76003 335 aaKnown RBP1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 KRT37O76014 449 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 RAPGEF3O95398 923 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 MATN4O95460 622 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 ESRRBO95718 433 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 HLA-DOAP06340 250 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 SPATA31D3P0C874 917 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 ITGAMP11215 1152 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 HNRNPLP14866 589 aaKnown RBP eCLIP1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 BMPR1AP36894 532 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 FNTBP49356 437 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 KIF11P52732 1056 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 RNASE9P60153 205 aaKnown RBP1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 BLOC1S1P78537 153 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 MXRA7P84157 204 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 SLC6A3Q01959 620 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 TP53BP2Q13625 1128 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 ARHGAP44Q17R89 818 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 BEAN1Q3B7T3 259 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 PIK3R6Q5UE93 754 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 PRAMEF9Q5VWM5 478 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 ZCCHC8Q6NZY4 707 aaKnown RBP1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 SPATA31D4Q6ZUB0 917 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 C1QL2Q7Z5L3 287 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 PLXDC1Q8IUK5 500 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 LILRB2Q8N423 598 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 ZSWIM2Q8NEG5 633 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 OR5M3Q8NGP4 307 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 ASB10Q8WXI3 467 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 RPGRQ92834 1020 aaKnown RBP1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 MKL1Q969V6 931 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 ARMC5Q96C12 935 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 MAML3Q96JK9 1138 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 ZNF778Q96MU6 729 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 CLUHP3Q96NS8 147 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 SRPK1Q96SB4 655 aaKnown RBP1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 PDCD2LQ9BRP1 358 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 HAPLN2Q9GZV7 340 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 SPON1Q9HCB6 807 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 NCOA5Q9HCD5 579 aaKnown RBP1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 KCMF1Q9P0J7 381 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 SAMD15Q9P1V8 674 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 ZNF580Q9UK33 172 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 SYNPO2Q9UMS6 1093 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 ZBTB32Q9Y2Y4 487 aaPredicted RBP1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 PTCH2Q9Y6C5 1203 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 TRIOBPQ9H2D6 2365 aa1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 FNDC1Q4ZHG4 1894 aaPredicted RBP1.16□□□□□ -2.22
RNU6-448P-201ENST00000517052 UBA6A0AVT1 1052 aaPredicted RBP1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 PTPDC1A2A3K4 754 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 WDR91A4D1P6 747 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 LRRC3CA6NJW4 275 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 PRR5-ARHGAP8B1AHC4 643 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 B4E1Z4 1266 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 DIRC3C9JPN6 131 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 LEFTY2O00292 366 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 PLD2O14939 933 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 MAFGO15525 162 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 MTSS1O43312 755 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 DNAJC8O75937 253 aaPredicted RBP1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 CYP17A1P05093 508 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 HSP90B1P14625 803 aaKnown RBP1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 PTX3P26022 381 aaPredicted RBP1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 DDX6P26196 483 aaKnown RBP eCLIP1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 IGFALSP35858 605 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 CASRP41180 1078 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 BCAR1P56945 870 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 KRTAP10-8P60410 259 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 NHLH1Q02575 133 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 NHLH2Q02577 135 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 RESTQ13127 1097 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 ZNF460Q14592 562 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 MYBPC3Q14896 1274 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 EPHA7Q15375 998 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 SRSF7Q16629 238 aaKnown RBP eCLIP1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 FNDC3BQ53EP0 1204 aaKnown RBP1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 C2orf27AQ580R0 203 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 METTL24Q5JXM2 366 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 TTC38Q5R3I4 469 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 CREB3L3Q68CJ9 461 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 SLFN12LQ6IEE8 588 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 ESRP1Q6NXG1 681 aaKnown RBP1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 KRTAP5-5Q701N2 237 aaPredicted RBP1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 KANSL1Q7Z3B3 1105 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 BMP8AQ7Z5Y6 402 aa1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 DDX53Q86TM3 631 aaKnown RBP1.15□□□□□ -2.23
RNU6-448P-201ENST00000517052 XYLT1Q86Y38 959 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms