RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 PHLPP2Q6ZVD8 1323 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 CNTNAP2Q9UHC6 1331 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 MYMKA6NI61 221 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 N4BP3O15049 544 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 INPPL1O15357 1258 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 TRAK2O60296 914 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 EDN1P05305 212 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 ITGB1P05556 798 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 KRT18P05783 430 aaKnown RBP12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 LIG1P18858 919 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 SCP2P22307 547 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 STAT6P42226 847 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 AFF1P51825 1210 aaKnown RBP12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 E2F4Q16254 413 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 SPOUT1Q5T280 376 aaKnown RBP12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 ATF7IP2Q5U623 682 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 ADALQ6DHV7 355 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 DYMQ7RTS9 669 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 HAUS6Q7Z4H7 955 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 IQUBQ8NA54 791 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 SPPL3Q8TCT6 385 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 LEO1Q8WVC0 666 aaPredicted RBP12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 DNAJC19Q96DA6 116 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 MRPL38Q96DV4 380 aaKnown RBP12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 CHAMP1Q96JM3 812 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 SPATA32Q96LK8 384 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 ACO2Q99798 780 aaKnown RBP12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 MRPL9Q9BYD2 267 aaKnown RBP12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 TRIM6Q9C030 488 aaPredicted RBP12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 SCAND2PQ9GZW5 306 aaPredicted RBP12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 PDZD7Q9H5P4 517 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 RSAD1Q9HA92 442 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 PARVGQ9HBI0 331 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 PTPRHQ9HD43 1115 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 ALG13Q9NP73 1137 aaKnown RBP12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 HCSTQ9UBK5 93 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 TNFSF13BQ9Y275 285 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 GIT1Q9Y2X7 761 aa12.27□□□□□ -0.45
SCARNA20-201ENST00000516768 H0YCG3 227 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 GRM6O15303 877 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 FAM13AO94988 1023 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 NPTXRO95502 500 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 MAPTP10636 758 aaKnown RBP12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 LAG3P18627 525 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 CMA1P23946 247 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 ALDH7A1P49419 539 aaKnown RBP12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 NCKAP1LP55160 1127 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 CAMK1Q14012 370 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 CCDC85BQ15834 202 aaPredicted RBP12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 PTPROQ16827 1216 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 CSPP1Q1MSJ5 1256 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 RESP18Q5W5W9 173 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 EEF1DP3Q658K8 133 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 KCNT2Q6UVM3 1135 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 HACE1Q8IYU2 909 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 LRRC43Q8N309 656 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 COLGALT1Q8NBJ5 622 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 FIZ1Q96SL8 496 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 ADPGKQ9BRR6 497 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 TARS2Q9BW92 718 aaKnown RBP12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 MRPL4Q9BYD3 311 aaKnown RBP12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 LMAN2LQ9H0V9 348 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 CUEDC2Q9H467 287 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 NXF3Q9H4D5 531 aaKnown RBP12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 NRDE2Q9H7Z3 1164 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 TBC1D13Q9NVG8 400 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 KBTBD4Q9NVX7 518 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 MIOSQ9NXC5 875 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 FAM13BQ9NYF5 915 aa12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 PRRC2BQ5JSZ5 2229 aaKnown RBP12.26□□□□□ -0.45
SCARNA20-201ENST00000516768 FNDC1Q4ZHG4 1894 aaPredicted RBP12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 ARL5CA6NH57 179 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 POLR2DO15514 142 aaKnown RBP12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 FGF18O76093 207 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 DDHD2O94830 711 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 ALDH2P05091 517 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 AKAP5P24588 427 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 BCAR1P56945 870 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 AMPD3Q01432 767 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 PLCB3Q01970 1234 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 RNASELQ05823 741 aaKnown RBP12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 STRN3Q13033 797 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 TMEM132AQ24JP5 1023 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 ZNF720Q7Z2F6 126 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 ZNF280BQ86YH2 543 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 GSTCDQ8NEC7 633 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 PPM1EQ8WY54 764 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 ZNF558Q96NG5 402 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 GAD1Q99259 594 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 LRRC27Q9C0I9 530 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 ST6GALNAC4Q9H4F1 302 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 ZHX3Q9H4I2 956 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 SPG21Q9NZD8 308 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 PARP2Q9UGN5 583 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 INPP5FQ9Y2H2 1132 aa12.25□□□□□ -0.45
SCARNA20-201ENST00000516768 TRANK1O15050 2925 aa12.24□□□□□ -0.45
SCARNA20-201ENST00000516768 CARNS1A5YM72 827 aa12.24□□□□□ -0.45
SCARNA20-201ENST00000516768 ABLIM1O14639 778 aa12.24□□□□□ -0.45
SCARNA20-201ENST00000516768 TBCAO75347 108 aaKnown RBP12.24□□□□□ -0.45
SCARNA20-201ENST00000516768 TOM1L1O75674 476 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms