RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 DHX37Q8IY37 1157 aaKnown RBP4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 MFSD3Q96ES6 412 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 CRAMP1Q96RY5 1269 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 FEZ1Q99689 392 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 FDXACB1Q9BRP7 624 aaPredicted RBP4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 NDC1Q9BTX1 674 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 SLC46A2Q9BY10 475 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 KCNH6Q9H252 994 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 SPTLC3Q9NUV7 552 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 PRR5-ARHGAP8B1AHC4 643 aa4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 CDC45O75419 566 aa4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 FKBP9O95302 570 aa4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 LTA4HP09960 611 aaKnown RBP4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 HSP90B1P14625 803 aaKnown RBP4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 LAG3P18627 525 aa4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 NR4A1P22736 598 aa4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 MEF2AQ02078 507 aaPredicted RBP4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 TAP1Q03518 808 aa4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 PPARAQ07869 468 aa4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 MGAT5Q09328 741 aa4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 FKBP9P1Q75LS8 142 aa4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 OR14C36Q8NHC7 312 aa4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 DCLRE1CQ96SD1 692 aaKnown RBP4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 MLST8Q9BVC4 326 aa4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 TARS2Q9BW92 718 aaKnown RBP4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 CPEB1Q9BZB8 566 aaKnown RBP4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 PACSIN3Q9UKS6 424 aa4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 HS3ST4Q9Y661 456 aa4.25□□□□□ -1.73
RNU4-49P-201ENST00000516080 GAGE12BA1L429 117 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 GAGE12HA6NDE8 117 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 B3GALT2O43825 422 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 CFBP00751 764 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 ADCYAP1R1P41586 468 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 MANFP55145 182 aaKnown RBP4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 COL10A1Q03692 680 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 UBE3CQ15386 1083 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 SEPT7Q16181 437 aaKnown RBP4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 DDB1Q16531 1140 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 C19orf54Q5BKX5 351 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 DRICH1Q6PGQ1 229 aaPredicted RBP4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 NPM2Q86SE8 214 aaKnown RBP4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 VRK3Q8IV63 474 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 MSL3Q8N5Y2 521 aaKnown RBP4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 MYEOVQ96EZ4 313 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 PAWRQ96IZ0 340 aaKnown RBP4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 CDC5LQ99459 802 aaKnown RBP4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 LSM14BQ9BX40 385 aaKnown RBP4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 PRSS50Q9UI38 385 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 TMPRSS11EQ9UL52 423 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 PPP2R3BQ9Y5P8 575 aa4.24□□□□□ -1.73
RNU4-49P-201ENST00000516080 AHRRA9YTQ3 701 aa4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 B5MCH6 92 aa4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 RNASET2O00584 256 aaKnown RBP4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 KDM1AO60341 852 aa4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 PRAMEF4O60810 478 aa4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 GASTP01350 101 aa4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 BMP5P22003 454 aa4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 APOBEC3AP31941 199 aaPredicted RBP4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 APBA1Q02410 837 aa4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 DALRD3Q5D0E6 543 aaKnown RBP4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 BROXQ5VW32 411 aa4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 GPRIN1Q7Z2K8 1008 aa4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 RASSF3Q86WH2 238 aa4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 SLC5A5Q92911 643 aa4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 ANO3Q9BYT9 981 aa4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 EMC7Q9NPA0 242 aa4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 NOC2LQ9Y3T9 749 aaKnown RBP4.23□□□□□ -1.73
RNU4-49P-201ENST00000516080 LCHNA4D1U4 455 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 DIRC3C9JPN6 131 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 CLEC2LP0C7M8 214 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 PROZP22891 400 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 MGAT1P26572 445 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 ADRA1BP35368 520 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 ATP13A4Q4VNC1 1196 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 CCDC62Q6P9F0 684 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 PDZD4Q76G19 769 aaPredicted RBP4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 GDF7Q7Z4P5 450 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 KIAA0907Q7Z7F0 614 aaPredicted RBP4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 LYSMD2Q8IV50 215 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 SLC41A1Q8IVJ1 513 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 MS4A5Q9H3V2 200 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 TOR3AQ9H497 397 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 ZNF768Q9H5H4 540 aaKnown RBP4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 CYP4F11Q9HBI6 524 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 SPON1Q9HCB6 807 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 TRPM5Q9NZQ8 1165 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 EVLQ9UI08 416 aaPredicted RBP4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 CDY2AQ9Y6F7 541 aa4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 MRPL42Q9Y6G3 142 aaKnown RBP4.22□□□□□ -1.73
RNU4-49P-201ENST00000516080 CENPVL1A0A0U1RR11 272 aa4.21□□□□□ -1.74
RNU4-49P-201ENST00000516080 GRID2IPA4D2P6 1211 aa4.21□□□□□ -1.74
RNU4-49P-201ENST00000516080 TMEM200CA6NKL6 621 aa4.21□□□□□ -1.74
RNU4-49P-201ENST00000516080 GSG1L2A8MUP6 293 aa4.21□□□□□ -1.74
RNU4-49P-201ENST00000516080 LMNAP02545 664 aaKnown RBP4.21□□□□□ -1.74
RNU4-49P-201ENST00000516080 ZFP36P26651 326 aaKnown RBP4.21□□□□□ -1.74
RNU4-49P-201ENST00000516080 TRIM25Q14258 630 aaKnown RBP4.21□□□□□ -1.74
RNU4-49P-201ENST00000516080 TAF7LQ5H9L4 462 aa4.21□□□□□ -1.74
RNU4-49P-201ENST00000516080 DPY19L2P1Q6NXN4 242 aa4.21□□□□□ -1.74
RNU4-49P-201ENST00000516080 EFCAB12Q6NXP0 572 aa4.21□□□□□ -1.74
RNU4-49P-201ENST00000516080 XYLT1Q86Y38 959 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms