RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 MEF2AQ02078 507 aaPredicted RBP3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 FSTL1Q12841 308 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 MRPL49Q13405 166 aaKnown RBP3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 TRIM25Q14258 630 aaKnown RBP3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 PITRM1Q5JRX3 1037 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 PCSK4Q6UW60 755 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 DOK3Q7L591 496 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 MRGPRGQ86SM5 289 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 FAM83AQ86UY5 434 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 RASSF3Q86WH2 238 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 SLC41A1Q8IVJ1 513 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 ZNF276Q8N554 614 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 GLB1L3Q8NCI6 653 aaPredicted RBP3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 OR52N2Q8NGI0 321 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 OR14C36Q8NHC7 312 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 PRRX2Q99811 253 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 CPEB1Q9BZB8 566 aaKnown RBP3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 NRDE2Q9H7Z3 1164 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 GPRC5BQ9NZH0 403 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 EVLQ9UI08 416 aaPredicted RBP3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 DMRT1Q9Y5R6 373 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 CDY2AQ9Y6F7 541 aa3.08□□□□□ -1.92
SNORA40.9-201ENST00000515895 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 NEMP1O14524 444 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 TRIM24O15164 1050 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 ZEB2O60315 1214 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 TMEM127O75204 238 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 PPFIA4O75335 1185 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 RECQL4O94761 1208 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 LTA4HP09960 611 aaKnown RBP3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 SESN3P58005 492 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 UBE3CQ15386 1083 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 VPS72Q15906 364 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 METTL24Q5JXM2 366 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 DDX46Q7L014 1031 aaKnown RBP3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 HDGFL2Q7Z4V5 671 aaPredicted RBP3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 RNF180Q86T96 592 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 THNSL2Q86YJ6 484 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 ULK2Q8IYT8 1036 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 RPUSD2Q8IZ73 545 aaKnown RBP3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 SYNE4Q8N205 404 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 CPT1CQ8TCG5 803 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 HAS1Q92839 578 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 LENG9Q96B70 501 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 FAM193BQ96PV7 902 aaPredicted RBP3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 TTC1Q99614 292 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 TTPALQ9BTX7 342 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 LSM14BQ9BX40 385 aaKnown RBP3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 SLKQ9H2G2 1235 aaPredicted RBP3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 KCTD10Q9H3F6 313 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 PRDM12Q9H4Q4 367 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 IFT22Q9H7X7 185 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 USP35Q9P2H5 1018 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 SORCS3Q9UPU3 1222 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 HDAC5Q9UQL6 1122 aa3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 APOBEC2Q9Y235 224 aaKnown RBP3.07□□□□□ -1.92
SNORA40.9-201ENST00000515895 RAMP2O60895 175 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 ULK1O75385 1050 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 SCAF4O95104 1147 aaKnown RBP3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 LPLP06858 475 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 ENPP1P22413 925 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 SOX5P35711 763 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 ID4P47928 161 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 LGALS4P56470 323 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 STRN3Q13033 797 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 PDCD1Q15116 288 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 FSCN1Q16658 493 aaKnown RBP3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 C19orf54Q5BKX5 351 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 CT83Q5H943 113 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 IQSEC1Q6DN90 963 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 LRRC55Q6ZSA7 311 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 RHOUQ7L0Q8 258 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 MRGPREQ86SM8 312 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 ZNF575Q86XF7 245 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 DNAJC10Q8IXB1 793 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 CLRN3Q8NCR9 226 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 SNX33Q8WV41 574 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 ZG16BQ96DA0 208 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 PAWRQ96IZ0 340 aaKnown RBP3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 ACAP3Q96P50 834 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 CDC5LQ99459 802 aaKnown RBP3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 TOPORSQ9NS56 1045 aaPredicted RBP3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 EIF2B4Q9UI10 523 aaKnown RBP3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 FZD1Q9UP38 647 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 CLCA2Q9UQC9 943 aa3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 TMA7Q9Y2S6 64 aaKnown RBP3.06□□□□□ -1.92
SNORA40.9-201ENST00000515895 TLDC2A0PJX2 215 aa3.05□□□□□ -1.92
SNORA40.9-201ENST00000515895 TMEM191CA6NGB0 347 aa3.05□□□□□ -1.92
SNORA40.9-201ENST00000515895 PRR5-ARHGAP8B1AHC4 643 aa3.05□□□□□ -1.92
SNORA40.9-201ENST00000515895 B5MCH6 92 aa3.05□□□□□ -1.92
SNORA40.9-201ENST00000515895 ITGA10O75578 1167 aa3.05□□□□□ -1.92
SNORA40.9-201ENST00000515895 GASTP01350 101 aa3.05□□□□□ -1.92
SNORA40.9-201ENST00000515895 ITGB1P05556 798 aa3.05□□□□□ -1.92
SNORA40.9-201ENST00000515895 HSP90B1P14625 803 aaKnown RBP3.05□□□□□ -1.92
SNORA40.9-201ENST00000515895 NR4A1P22736 598 aa3.05□□□□□ -1.92
SNORA40.9-201ENST00000515895 CTSSP25774 331 aa3.05□□□□□ -1.92
SNORA40.9-201ENST00000515895 PTTG1IPP53801 180 aa3.05□□□□□ -1.92
SNORA40.9-201ENST00000515895 COL10A1Q03692 680 aa3.05□□□□□ -1.92
SNORA40.9-201ENST00000515895 UGT8Q16880 541 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms