RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.8□□□□□ -0.52
CLDND1-231ENST00000515620 TMEM150BA6NC51 233 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 F8W810 466 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 hCG_1984214I3L0E3 225 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 SLC30A4O14863 429 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 TGM5O43548 720 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 GAS2O43903 313 aaKnown RBP11.8□□□□□ -0.52
CLDND1-231ENST00000515620 PAPLNO95428 1278 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 CHMLP26374 656 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 TARSP26639 723 aaKnown RBP11.8□□□□□ -0.52
CLDND1-231ENST00000515620 MAGEA9P43362 315 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 DNM2P50570 870 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 CDC42EP1Q00587 391 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 DSG1Q02413 1049 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 COL9A2Q14055 689 aaPredicted RBP11.8□□□□□ -0.52
CLDND1-231ENST00000515620 TARBP2Q15633 366 aaKnown RBP11.8□□□□□ -0.52
CLDND1-231ENST00000515620 ZBTB41Q5SVQ8 909 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 ZNF410Q86VK4 478 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 KSR1Q8IVT5 923 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 ZNF713Q8N859 430 aaPredicted RBP11.8□□□□□ -0.52
CLDND1-231ENST00000515620 NELL1Q92832 810 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 SH2D3AQ9BRG2 576 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 OSBPL6Q9BZF3 934 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 INO80BQ9C086 356 aaPredicted RBP11.8□□□□□ -0.52
CLDND1-231ENST00000515620 GLT8D2Q9H1C3 349 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 AGPAT5Q9NUQ2 364 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 KANSL3Q9P2N6 904 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 SUCLA2Q9P2R7 463 aaPredicted RBP11.8□□□□□ -0.52
CLDND1-231ENST00000515620 CDH7Q9ULB5 785 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 RAB23Q9ULC3 237 aa11.8□□□□□ -0.52
CLDND1-231ENST00000515620 ZFP37Q9Y6Q3 630 aaPredicted RBP11.8□□□□□ -0.52
CLDND1-231ENST00000515620 V9GY48 417 aaPredicted RBP11.8□□□□□ -0.52
CLDND1-231ENST00000515620 ADAMTS3O15072 1205 aa11.79□□□□□ -0.52
CLDND1-231ENST00000515620 RPL17P18621 184 aaKnown RBP11.79□□□□□ -0.52
CLDND1-231ENST00000515620 NTHL1P78549 312 aa11.79□□□□□ -0.52
CLDND1-231ENST00000515620 PFKPQ01813 784 aa11.79□□□□□ -0.52
CLDND1-231ENST00000515620 DMWDQ09019 674 aa11.79□□□□□ -0.52
CLDND1-231ENST00000515620 TPRG1Q6ZUI0 275 aa11.79□□□□□ -0.52
CLDND1-231ENST00000515620 MTSS1LQ765P7 747 aa11.79□□□□□ -0.52
CLDND1-231ENST00000515620 GRASPQ7Z6J2 395 aaPredicted RBP11.79□□□□□ -0.52
CLDND1-231ENST00000515620 COLGALT2Q8IYK4 626 aa11.79□□□□□ -0.52
CLDND1-231ENST00000515620 RNF168Q8IYW5 571 aaPredicted RBP11.79□□□□□ -0.52
CLDND1-231ENST00000515620 KXD1Q9BQD3 176 aa11.79□□□□□ -0.52
CLDND1-231ENST00000515620 PRMT8Q9NR22 394 aaPredicted RBP11.79□□□□□ -0.52
CLDND1-231ENST00000515620 RBM28Q9NW13 759 aaKnown RBP11.79□□□□□ -0.52
CLDND1-231ENST00000515620 FAM208BQ5VWN6 2430 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 SGSM2O43147 1006 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 GAS7O60861 476 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 ZMYND10O75800 440 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 EFEMP2O95967 443 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 IGHDP01880 384 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 FUT2Q10981 343 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 MTAPQ13126 283 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 TTC22Q5TAA0 569 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 DIEXFQ68CQ4 756 aaKnown RBP11.78□□□□□ -0.52
CLDND1-231ENST00000515620 LAIR1Q6GTX8 287 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 APOA5Q6Q788 366 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 RSPO2Q6UXX9 243 aaPredicted RBP11.78□□□□□ -0.52
CLDND1-231ENST00000515620 SYNE3Q6ZMZ3 975 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 MRPL10Q7Z7H8 261 aaKnown RBP11.78□□□□□ -0.52
CLDND1-231ENST00000515620 FGF13Q92913 245 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 MAP4K1Q92918 833 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 CLDN23Q96B33 292 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 LENG9Q96B70 501 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 PHF20Q9BVI0 1012 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 UNC45AQ9H3U1 944 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 FAM217BQ9NTX9 383 aaPredicted RBP11.78□□□□□ -0.52
CLDND1-231ENST00000515620 ANGPTL2Q9UKU9 493 aa11.78□□□□□ -0.52
CLDND1-231ENST00000515620 IGKV6-21A0A0C4DH24 114 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 SFNP31947 248 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 MLH1P40692 756 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 RPS9P46781 194 aaKnown RBP11.77□□□□□ -0.53
CLDND1-231ENST00000515620 JAK3P52333 1124 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 RTN1Q16799 776 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 XKR3Q5GH77 459 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 UBXN11Q5T124 520 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 LILRA6Q6PI73 481 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 PRR23BQ6ZRT6 265 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 SGMS1Q86VZ5 419 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 REXO1Q8N1G1 1221 aaKnown RBP11.77□□□□□ -0.53
CLDND1-231ENST00000515620 ITFG1Q8TB96 612 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 CEP89Q96ST8 783 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 GAD1Q99259 594 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 NIFKQ9BYG3 293 aaKnown RBP11.77□□□□□ -0.53
CLDND1-231ENST00000515620 FAM126AQ9BYI3 521 aaPredicted RBP11.77□□□□□ -0.53
CLDND1-231ENST00000515620 IFT122Q9HBG6 1241 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.77□□□□□ -0.53
CLDND1-231ENST00000515620 CHST7Q9NS84 486 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 POLIQ9UNA4 740 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 WDR81Q562E7 1941 aa11.77□□□□□ -0.53
CLDND1-231ENST00000515620 ARL5CA6NH57 179 aa11.76□□□□□ -0.53
CLDND1-231ENST00000515620 NCAM2O15394 837 aa11.76□□□□□ -0.53
CLDND1-231ENST00000515620 MSH4O15457 936 aa11.76□□□□□ -0.53
CLDND1-231ENST00000515620 CCL16O15467 120 aa11.76□□□□□ -0.53
CLDND1-231ENST00000515620 NR1I2O75469 434 aa11.76□□□□□ -0.53
CLDND1-231ENST00000515620 C1RP00736 705 aa11.76□□□□□ -0.53
CLDND1-231ENST00000515620 ITGA4P13612 1032 aa11.76□□□□□ -0.53
CLDND1-231ENST00000515620 NCLP19338 710 aaKnown RBP11.76□□□□□ -0.53
CLDND1-231ENST00000515620 SCNN1GP51170 649 aa11.76□□□□□ -0.53
CLDND1-231ENST00000515620 CREMQ03060 361 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms