RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 LGALS16A8MUM7 142 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 ZNF197O14709 1029 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 SMARCA1P28370 1054 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 USP11P51784 963 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 KNOP1Q1ED39 458 aaKnown RBP17.03■□□□□ 0.32
TRIM41-207ENST00000515223 TKFCQ3LXA3 575 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 STRIP1Q5VSL9 837 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 ENAHQ8N8S7 591 aaPredicted RBP17.03■□□□□ 0.32
TRIM41-207ENST00000515223 ZNF668Q96K58 619 aaPredicted RBP17.03■□□□□ 0.32
TRIM41-207ENST00000515223 CEP72Q9P209 647 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 CTDNEP1O95476 244 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 SRLQ86TD4 932 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 NEDD1Q8NHV4 660 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 WHAMMQ8TF30 809 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 SPATA17Q96L03 361 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 JPH1Q9HDC5 661 aaPredicted RBP17.03■□□□□ 0.32
TRIM41-207ENST00000515223 RBAKQ9NYW8 714 aaPredicted RBP17.03■□□□□ 0.32
TRIM41-207ENST00000515223 TTC26A0AVF1 554 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 ZNF189O75820 626 aaPredicted RBP17.02■□□□□ 0.32
TRIM41-207ENST00000515223 TSPYL2Q9H2G4 693 aaPredicted RBP17.02■□□□□ 0.32
TRIM41-207ENST00000515223 SARS2Q9NP81 518 aaKnown RBP17.02■□□□□ 0.32
TRIM41-207ENST00000515223 PACSIN2Q9UNF0 486 aaPredicted RBP17.02■□□□□ 0.32
TRIM41-207ENST00000515223 POTEB3A0JP26 581 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 POTECB2RU33 542 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 HNRNPCL2B2RXH8 293 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 HNRNPCL1O60812 293 aaKnown RBP17.02■□□□□ 0.32
TRIM41-207ENST00000515223 PRAMEP78395 509 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 CDK17Q00537 523 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 ZNF235Q14590 738 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 POTEBQ6S5H4 581 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 ZNF579Q8NAF0 562 aaKnown RBP17.02■□□□□ 0.32
TRIM41-207ENST00000515223 CENPKQ9BS16 269 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 TEX12Q9BXU0 123 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 CDC42BPGQ6DT37 1551 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 SETD1BQ9UPS6 1966 aaKnown RBP17.02■□□□□ 0.32
TRIM41-207ENST00000515223 KPNA7A9QM74 516 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 H3BRJ5 948 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 MTMR2Q13614 643 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 HEATR6Q6AI08 1181 aaKnown RBP17.02■□□□□ 0.32
TRIM41-207ENST00000515223 CERKQ8TCT0 537 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 EHD2Q9NZN4 543 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 THEGQ9P2T0 379 aa17.02■□□□□ 0.32
TRIM41-207ENST00000515223 WDR19Q8NEZ3 1342 aa17.02■□□□□ 0.31
TRIM41-207ENST00000515223 STXBP3O00186 592 aa17.02■□□□□ 0.31
TRIM41-207ENST00000515223 ZNF185O15231 689 aa17.02■□□□□ 0.31
TRIM41-207ENST00000515223 TADA2AO75478 443 aa17.02■□□□□ 0.31
TRIM41-207ENST00000515223 GNA15P30679 374 aa17.02■□□□□ 0.31
TRIM41-207ENST00000515223 SCARF1Q14162 830 aa17.02■□□□□ 0.31
TRIM41-207ENST00000515223 ACBD5Q5T8D3 534 aaPredicted RBP17.02■□□□□ 0.31
TRIM41-207ENST00000515223 SPATA2LQ8IUW3 424 aaPredicted RBP17.02■□□□□ 0.31
TRIM41-207ENST00000515223 PBXIP1Q96AQ6 731 aa17.02■□□□□ 0.31
TRIM41-207ENST00000515223 AGO2Q9UKV8 859 aaKnown RBP17.02■□□□□ 0.31
TRIM41-207ENST00000515223 TNS3Q68CZ2 1445 aa17.02■□□□□ 0.31
TRIM41-207ENST00000515223 PALMO75781 387 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 GFPT1Q06210 699 aaPredicted RBP17.01■□□□□ 0.31
TRIM41-207ENST00000515223 EPHA7Q15375 998 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 IER5Q5VY09 327 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 TRIM72Q6ZMU5 477 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 TRIM15Q9C019 465 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 ZMYND12Q9H0C1 365 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 SIK2Q9H0K1 926 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 TRIM10Q9UDY6 481 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 FAM95CA0A1B0GW59 222 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 DYNC1LI2O43237 492 aaPredicted RBP17.01■□□□□ 0.31
TRIM41-207ENST00000515223 FGGP02679 453 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 ESRRGP62508 458 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 NME3Q13232 169 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 THEMIS2Q5TEJ8 643 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 EMBQ6PCB8 327 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 RNF149Q8NC42 400 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 BARHL2Q9NY43 387 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 CFLARO15519 480 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 ANP32DO95626 131 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 COASYQ13057 564 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 PPP4R4Q6NUP7 873 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 PGBD3Q8N328 593 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 GPD1LQ8N335 351 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 EGFL8Q99944 293 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 BFARQ9NZS9 450 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 KCNQ2O43526 872 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 ALX1Q15699 326 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 CRLF3Q8IUI8 442 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 WDR75Q8IWA0 830 aaKnown RBP17.01■□□□□ 0.31
TRIM41-207ENST00000515223 COPEO14579 308 aa17.01■□□□□ 0.31
TRIM41-207ENST00000515223 C6orf118Q5T5N4 469 aa17■□□□□ 0.31
TRIM41-207ENST00000515223 SAYSD1Q9NPB0 183 aa17■□□□□ 0.31
TRIM41-207ENST00000515223 PCDHB8Q9UN66 801 aa17■□□□□ 0.31
TRIM41-207ENST00000515223 WDR91A4D1P6 747 aa17■□□□□ 0.31
TRIM41-207ENST00000515223 KIAA0391O15091 583 aaKnown RBP17■□□□□ 0.31
TRIM41-207ENST00000515223 DDX5P17844 614 aaKnown RBP17■□□□□ 0.31
TRIM41-207ENST00000515223 CUL1Q13616 776 aa17■□□□□ 0.31
TRIM41-207ENST00000515223 RIN2Q8WYP3 895 aaPredicted RBP17■□□□□ 0.31
TRIM41-207ENST00000515223 NCLNQ969V3 563 aa17■□□□□ 0.31
TRIM41-207ENST00000515223 SMARCAD1Q9H4L7 1026 aa17■□□□□ 0.31
TRIM41-207ENST00000515223 IP6K2Q9UHH9 426 aa17■□□□□ 0.31
TRIM41-207ENST00000515223 RFX7Q2KHR2 1363 aa17■□□□□ 0.31
TRIM41-207ENST00000515223 PYGLP06737 847 aa17■□□□□ 0.31
TRIM41-207ENST00000515223 ZFXP17010 805 aaPredicted RBP17■□□□□ 0.31
TRIM41-207ENST00000515223 HSD17B4P51659 736 aa17■□□□□ 0.31
TRIM41-207ENST00000515223 ADCY2Q08462 1091 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms