RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 METTL13Q8N6R0 699 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 ACTRT1Q8TDG2 376 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 ZNF526Q8TF50 670 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 SEMA4DQ92854 862 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 VTI1AQ96AJ9 217 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 MAF1Q9H063 256 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 THAP2Q9H0W7 228 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 PLEKHA4Q9H4M7 779 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 TOPORSQ9NS56 1045 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 USP20Q9Y2K6 914 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 KIAA1217Q5T5P2 1943 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 ANKRD62A6NC57 917 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 HNRNPDLO14979 420 aaKnown RBP8.86□□□□□ -0.99
CPNE4-211ENST00000514439 SYF2O95926 243 aaKnown RBP8.86□□□□□ -0.99
CPNE4-211ENST00000514439 RTP1P59025 263 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 CNTN2Q02246 1040 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 PPATQ06203 517 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 FSTL1Q12841 308 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 STXBP2Q15833 593 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 MTERF2Q49AM1 385 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 XKR3Q5GH77 459 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 KRT39Q6A163 491 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 EMBQ6PCB8 327 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 CYFIP1Q7L576 1253 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 TAS1R3Q7RTX0 852 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 PPM1KQ8N3J5 372 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 CHST13Q8NET6 341 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 DNERQ8NFT8 737 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 POMGNT1Q8WZA1 660 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 HES6Q96HZ4 224 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 FBXL18Q96ME1 805 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 KREMEN1Q96MU8 473 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 POP1Q99575 1024 aaKnown RBP8.86□□□□□ -0.99
CPNE4-211ENST00000514439 POLR3FQ9H1D9 316 aaPredicted RBP8.86□□□□□ -0.99
CPNE4-211ENST00000514439 TMEM8AQ9HCN3 771 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 GDF3Q9NR23 364 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 NOC2LQ9Y3T9 749 aaKnown RBP8.86□□□□□ -0.99
CPNE4-211ENST00000514439 LOC285556D6RIA3 1793 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 LCTP09848 1927 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 ARID2Q68CP9 1835 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 WDR90Q96KV7 1748 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 ESYT3A0FGR9 886 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 PGRMC1O00264 195 aaKnown RBP8.86□□□□□ -0.99
CPNE4-211ENST00000514439 RAD51CO43502 376 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 RNF40O75150 1001 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 ICAM3P32942 547 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 USP8P40818 1118 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 GUCY2DQ02846 1103 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 CYP24A1Q07973 514 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 LBX2Q6XYB7 198 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 KLHL7Q8IXQ5 586 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 IFT20Q8IY31 132 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 FAM71AQ8IYT1 594 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 RPUSD2Q8IZ73 545 aaKnown RBP8.86□□□□□ -0.99
CPNE4-211ENST00000514439 ANKRD35Q8N283 1001 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 RASGEF1CQ8N431 466 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 TMC2Q8TDI7 906 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 TAS1R2Q8TE23 839 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 EPS8L1Q8TE68 723 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 SCFD2Q8WU76 684 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 SHC3Q92529 594 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 EXOC4Q96A65 974 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 BICD1Q96G01 975 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 IFT74Q96LB3 600 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 MFSD14AQ96MC6 490 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.86□□□□□ -0.99
CPNE4-211ENST00000514439 DOCK5Q9H7D0 1870 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 EPB41L5Q9HCM4 733 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 ARHGAP28Q9P2N2 729 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 AMFRQ9UKV5 643 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 COG5Q9UP83 839 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 COQ4Q9Y3A0 265 aa8.86□□□□□ -0.99
CPNE4-211ENST00000514439 ERICH4A6NGS2 130 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 AGPSO00116 658 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 SGPL1O95470 568 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 ATP4AP20648 1035 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 GGCXP38435 758 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 CARSP49589 748 aaKnown RBP8.85□□□□□ -0.99
CPNE4-211ENST00000514439 GPC3P51654 580 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 EMC2Q15006 297 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 BRDTQ58F21 947 aaPredicted RBP8.85□□□□□ -0.99
CPNE4-211ENST00000514439 SEPT14Q6ZU15 432 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 NOP9Q86U38 636 aaKnown RBP8.85□□□□□ -0.99
CPNE4-211ENST00000514439 GPD1LQ8N335 351 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 FBXL13Q8NEE6 735 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 RIN2Q8WYP3 895 aaPredicted RBP8.85□□□□□ -0.99
CPNE4-211ENST00000514439 CAVIN3Q969G5 261 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 CALR3Q96L12 384 aaKnown RBP8.85□□□□□ -0.99
CPNE4-211ENST00000514439 ISCUQ9H1K1 167 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 ZNF302Q9NR11 478 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 BTBD7Q9P203 1132 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 NOCTQ9UK39 431 aaKnown RBP8.85□□□□□ -0.99
CPNE4-211ENST00000514439 SYNGAP1Q96PV0 1343 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 GOLGA6BA6NDN3 693 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 CYP26A1O43174 497 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 ATG7O95352 703 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 FTLP02792 175 aaPredicted RBP8.85□□□□□ -0.99
CPNE4-211ENST00000514439 DLATP10515 647 aaKnown RBP8.85□□□□□ -0.99
CPNE4-211ENST00000514439 CHRNB2P17787 502 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 GARTP22102 1010 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms