RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 COBLL1Q53SF7 1204 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 SLFN12LQ6IEE8 588 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 PSRC1Q6PGN9 363 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 HS2ST1Q7LGA3 356 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 GUF1Q8N442 669 aaKnown RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 ZNF507Q8TCN5 953 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 DHX38Q92620 1227 aaKnown RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 KCNN1Q92952 543 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 DHTKD1Q96HY7 919 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 ZNF668Q96K58 619 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 OSMRQ99650 979 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 TSG101Q99816 390 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 TCHPQ9BT92 498 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 GZF1Q9H116 711 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 FZD8Q9H461 694 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 PRDM6Q9NQX0 595 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 CGNQ9P2M7 1197 aaKnown RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 YBX2Q9Y2T7 364 aaKnown RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 TCHHQ07283 1943 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 BICDL2A1A5D9 508 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 CALUO43852 315 aaPredicted RBP11.13□□□□□ -0.63
NEDD9-214ENST00000513989 PRPF6O94906 941 aaKnown RBP11.13□□□□□ -0.63
NEDD9-214ENST00000513989 FGFR1OPO95684 399 aaKnown RBP11.13□□□□□ -0.63
NEDD9-214ENST00000513989 PRKCBP05771 671 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 MYBP10242 640 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 MATR3P43243 847 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEDD9-214ENST00000513989 LIG4P49917 911 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 CCL23P55773 120 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 MBTD1Q05BQ5 628 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 MGAT3Q09327 533 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 ADGRE1Q14246 886 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 STX1AQ16623 288 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 ZC2HC1CQ53FD0 456 aaPredicted RBP11.13□□□□□ -0.63
NEDD9-214ENST00000513989 FBXO47Q5MNV8 452 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 TSHZ1Q6ZSZ6 1077 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 SCFD1Q8WVM8 642 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 SEPT8Q92599 483 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 APBB2Q92870 758 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 HPS3Q969F9 1004 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 KIFC3Q9BVG8 833 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 FTHL17Q9BXU8 183 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 CDHR5Q9HBB8 845 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 CHST12Q9NRB3 414 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 ST3GAL5Q9UNP4 418 aa11.13□□□□□ -0.63
NEDD9-214ENST00000513989 SYCE3A1L190 88 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 GHRP10912 638 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 RPL13P26373 211 aaKnown RBP11.12□□□□□ -0.63
NEDD9-214ENST00000513989 PRCPP42785 496 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 BMT2Q1RMZ1 405 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 NOTUMQ6P988 496 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 ZPBP2Q6X784 338 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 EPM2AIP1Q7L775 607 aaPredicted RBP11.12□□□□□ -0.63
NEDD9-214ENST00000513989 OTOP2Q7RTS6 562 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 MAP4K3Q8IVH8 894 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 ADSSL1Q8N142 457 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 WNT8BQ93098 351 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 CCDC51Q96ER9 411 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 SCLYQ96I15 445 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 FIZ1Q96SL8 496 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 ADPGKQ9BRR6 497 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 STRA6Q9BX79 667 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 GBP3Q9H0R5 595 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 PRDM12Q9H4Q4 367 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 PADI3Q9ULW8 664 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 MAPK8IP1Q9UQF2 711 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 NOC2LQ9Y3T9 749 aaKnown RBP11.12□□□□□ -0.63
NEDD9-214ENST00000513989 MICAL3Q7RTP6 2002 aa11.12□□□□□ -0.63
NEDD9-214ENST00000513989 PDXKO00764 312 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 HNRNPDLO14979 420 aaKnown RBP11.11□□□□□ -0.63
NEDD9-214ENST00000513989 N4BP3O15049 544 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 KIAA0391O15091 583 aaKnown RBP11.11□□□□□ -0.63
NEDD9-214ENST00000513989 CLDN3O15551 220 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 CSDE1O75534 798 aaKnown RBP11.11□□□□□ -0.63
NEDD9-214ENST00000513989 TOM1L1O75674 476 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 PPP1R37O75864 691 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 PFKMP08237 780 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 SKIP12755 728 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 MYOGP15173 224 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 ERCC5P28715 1186 aaPredicted RBP11.11□□□□□ -0.63
NEDD9-214ENST00000513989 RABGGTBP53611 331 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 TYRO3Q06418 890 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 PAK1Q13153 545 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 LPIN1Q14693 890 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 TPD52L1Q16890 204 aaPredicted RBP11.11□□□□□ -0.63
NEDD9-214ENST00000513989 ATF7IP2Q5U623 682 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 KLHL10Q6JEL2 608 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 NELFCDQ8IXH7 590 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 HACE1Q8IYU2 909 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 KIAA0895Q8NCT3 520 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 IFIH1Q9BYX4 1025 aaKnown RBP11.11□□□□□ -0.63
NEDD9-214ENST00000513989 TRIM6Q9C030 488 aaPredicted RBP11.11□□□□□ -0.63
NEDD9-214ENST00000513989 CCDC113Q9H0I3 377 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 NKX2-4Q9H2Z4 354 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 MINDY3Q9H8M7 445 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 GDAQ9Y2T3 454 aa11.11□□□□□ -0.63
NEDD9-214ENST00000513989 SIP14410 1827 aa11.1□□□□□ -0.63
NEDD9-214ENST00000513989 ATG2AQ2TAZ0 1938 aa11.1□□□□□ -0.63
NEDD9-214ENST00000513989 A0A1B0GUA9 196 aa11.1□□□□□ -0.63
NEDD9-214ENST00000513989 PPP1R3GB7ZBB8 358 aa11.1□□□□□ -0.63
NEDD9-214ENST00000513989 TSPAN1O60635 241 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms