RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 ANKFY1Q9P2R3 1169 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 SEL1LQ9UBV2 794 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 COL4A6Q14031 1691 aa12.44□□□□□ -0.42
HTT-213ENST00000513806 NLRC5Q86WI3 1866 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 SMC2O95347 1197 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 MBD3O95983 291 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 MYL1P05976 194 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 CD44P16070 742 aaKnown RBP12.43□□□□□ -0.42
HTT-213ENST00000513806 ZSCAN20P17040 1043 aaPredicted RBP12.43□□□□□ -0.42
HTT-213ENST00000513806 MATR3P43243 847 aaKnown RBP eCLIP12.43□□□□□ -0.42
HTT-213ENST00000513806 OSTNP61366 133 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 ZBTB41Q5SVQ8 909 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 MAP4K3Q8IVH8 894 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 TMEM192Q8IY95 271 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 ZNF710Q8N1W2 664 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 TMEM130Q8N3G9 435 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 SPATA20Q8TB22 786 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 HERVK_113Q902F9 699 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 RNPC3Q96LT9 517 aaKnown RBP12.43□□□□□ -0.42
HTT-213ENST00000513806 MRPL4Q9BYD3 311 aaKnown RBP12.43□□□□□ -0.42
HTT-213ENST00000513806 TSPYL2Q9H2G4 693 aaPredicted RBP12.43□□□□□ -0.42
HTT-213ENST00000513806 NXF3Q9H4D5 531 aaKnown RBP12.43□□□□□ -0.42
HTT-213ENST00000513806 RGS18Q9NS28 235 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 KIAA1468Q9P260 1216 aa12.43□□□□□ -0.42
HTT-213ENST00000513806 HOOK1Q9UJC3 728 aaKnown RBP12.43□□□□□ -0.42
HTT-213ENST00000513806 RALGAPA2Q2PPJ7 1873 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 A0A1B0GUA9 196 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 C9IYK1 514 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 ABLIM1O14639 778 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 HNRNPDLO14979 420 aaKnown RBP12.42□□□□□ -0.42
HTT-213ENST00000513806 CLIC2O15247 247 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 PFKMP08237 780 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 FGFR1P11362 822 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 ACTN1P12814 892 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 ATF7P17544 494 aaPredicted RBP12.42□□□□□ -0.42
HTT-213ENST00000513806 AKAP5P24588 427 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 PRCPP42785 496 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 LIG4P49917 911 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 RABGGTBP53611 331 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 MORC3Q14149 939 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 KCNB1Q14721 858 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 NOTUMQ6P988 496 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 ECHDC2Q86YB7 292 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 ELOA2Q8IYF1 753 aaPredicted RBP12.42□□□□□ -0.42
HTT-213ENST00000513806 SYCP3Q8IZU3 236 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 SMG8Q8ND04 991 aaKnown RBP12.42□□□□□ -0.42
HTT-213ENST00000513806 ZNF507Q8TCN5 953 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 NOC3LQ8WTT2 800 aaKnown RBP12.42□□□□□ -0.42
HTT-213ENST00000513806 APBB2Q92870 758 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 CCDC34Q96HJ3 373 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 PRIMPOLQ96LW4 560 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 ACCSQ96QU6 501 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 CDT1Q9H211 546 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 ST6GALNAC4Q9H4F1 302 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 PCIF1Q9H4Z3 704 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 FAM105AQ9NUU6 356 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 KLK14Q9P0G3 267 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 COLQQ9Y215 455 aaPredicted RBP12.42□□□□□ -0.42
HTT-213ENST00000513806 PCDHB2Q9Y5E7 798 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 PCDHB13Q9Y5F0 798 aa12.42□□□□□ -0.42
HTT-213ENST00000513806 ABHD14A-ACY1A0A1B0GW23 586 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 GOLGA8IPA6NC78 632 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 GOLGA8JA6NMD2 632 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 H0YCG3 227 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 TULP1O00294 542 aaPredicted RBP12.41□□□□□ -0.42
HTT-213ENST00000513806 N4BP3O15049 544 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 TGFB1I1O43294 461 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 MYOGP15173 224 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 PROZP22891 400 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 ADSSP30520 456 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 TNFSF9P41273 254 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 KCNJ6P48051 423 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 AFF1P51825 1210 aaKnown RBP12.41□□□□□ -0.42
HTT-213ENST00000513806 PSMD2Q13200 908 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 ZNF568Q3ZCX4 644 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 PAN2Q504Q3 1202 aaKnown RBP12.41□□□□□ -0.42
HTT-213ENST00000513806 CCDC183Q5T5S1 534 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 ZNF658Q5TYW1 1059 aaPredicted RBP12.41□□□□□ -0.42
HTT-213ENST00000513806 RASIP1Q5U651 963 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 KLHL10Q6JEL2 608 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 SLC27A1Q6PCB7 646 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 THNSL1Q8IYQ7 743 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 CCDC47Q96A33 483 aaKnown RBP12.41□□□□□ -0.42
HTT-213ENST00000513806 SAAL1Q96ER3 474 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 GSDMAQ96QA5 445 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 CBWD1Q9BRT8 395 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 TCHPQ9BT92 498 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 FTHL17Q9BXU8 183 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 PRO3102Q9H379 93 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 PTPRHQ9HD43 1115 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 SNTG2Q9NY99 539 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 HCSTQ9UBK5 93 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 TNFSF13BQ9Y275 285 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 IPPQ9Y573 584 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 TRIOBPQ9H2D6 2365 aa12.41□□□□□ -0.42
HTT-213ENST00000513806 TRIM49BA6NDI0 452 aa12.4□□□□□ -0.42
HTT-213ENST00000513806 EIF3DO15371 548 aaKnown RBP eCLIP12.4□□□□□ -0.42
HTT-213ENST00000513806 MEFVO15553 781 aaPredicted RBP12.4□□□□□ -0.42
HTT-213ENST00000513806 BAIAP3O94812 1187 aa12.4□□□□□ -0.42
HTT-213ENST00000513806 AXLP30530 894 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms