RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 KANK3Q6NY19 840 aa11.37□□□□□ -0.59
PTPN20-227ENST00000513159 MAP4K3Q8IVH8 894 aa11.37□□□□□ -0.59
PTPN20-227ENST00000513159 SCFD1Q8WVM8 642 aa11.37□□□□□ -0.59
PTPN20-227ENST00000513159 TOP1MTQ969P6 601 aa11.37□□□□□ -0.59
PTPN20-227ENST00000513159 FTHL17Q9BXU8 183 aa11.37□□□□□ -0.59
PTPN20-227ENST00000513159 CXCL16Q9H2A7 254 aa11.37□□□□□ -0.59
PTPN20-227ENST00000513159 RNF39Q9H2S5 420 aa11.37□□□□□ -0.59
PTPN20-227ENST00000513159 CLSTN2Q9H4D0 955 aa11.37□□□□□ -0.59
PTPN20-227ENST00000513159 MRPL44Q9H9J2 332 aaKnown RBP11.37□□□□□ -0.59
PTPN20-227ENST00000513159 RC3H2Q9HBD1 1191 aaKnown RBP11.37□□□□□ -0.59
PTPN20-227ENST00000513159 SLC39A2Q9NP94 309 aa11.37□□□□□ -0.59
PTPN20-227ENST00000513159 CHST12Q9NRB3 414 aa11.37□□□□□ -0.59
PTPN20-227ENST00000513159 GDAQ9Y2T3 454 aa11.37□□□□□ -0.59
PTPN20-227ENST00000513159 RALGAPA2Q2PPJ7 1873 aa11.37□□□□□ -0.59
PTPN20-227ENST00000513159 A0A0U1RQF3 1178 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 FAM189A1O60320 539 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 ZNF623O75123 536 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 ERLIN2O94905 339 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 ARHGEF15O94989 841 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 ADSSP30520 456 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 AXLP30530 894 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 PRPF4BQ13523 1007 aaKnown RBP11.36□□□□□ -0.59
PTPN20-227ENST00000513159 KCNB1Q14721 858 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 PCBP1Q15365 356 aaKnown RBP eCLIP11.36□□□□□ -0.59
PTPN20-227ENST00000513159 L1TD1Q5T7N2 865 aaKnown RBP11.36□□□□□ -0.59
PTPN20-227ENST00000513159 SLC24A5Q71RS6 500 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 MRPL10Q7Z7H8 261 aaKnown RBP11.36□□□□□ -0.59
PTPN20-227ENST00000513159 ECHDC2Q86YB7 292 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 TDHQ8IZJ6 230 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 CEP120Q8N960 986 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 ZSWIM2Q8NEG5 633 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 ZNF507Q8TCN5 953 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 LPPQ93052 612 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 RNPC3Q96LT9 517 aaKnown RBP11.36□□□□□ -0.59
PTPN20-227ENST00000513159 FAM105AQ9NUU6 356 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 MAN1B1Q9UKM7 699 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 TNFSF13BQ9Y275 285 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 HES2Q9Y543 173 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 ATG2AQ2TAZ0 1938 aa11.36□□□□□ -0.59
PTPN20-227ENST00000513159 CHD7Q9P2D1 2997 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 SZT2Q5T011 3432 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 ZBBXA8MT70 800 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 TGFB1I1O43294 461 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 GCNT3O95395 438 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 NPTXRO95502 500 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 ACTN1P12814 892 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 AFF1P51825 1210 aaKnown RBP11.35□□□□□ -0.59
PTPN20-227ENST00000513159 RABGGTBP53611 331 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 BMT2Q1RMZ1 405 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 CLLU1OSQ5K130 101 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 ATF7IP2Q5U623 682 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 TWF2Q6IBS0 349 aaKnown RBP11.35□□□□□ -0.59
PTPN20-227ENST00000513159 NOTUMQ6P988 496 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 AGMOQ6ZNB7 445 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 SPRED2Q7Z698 418 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 TMEM192Q8IY95 271 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 SMYD4Q8IYR2 804 aaPredicted RBP11.35□□□□□ -0.59
PTPN20-227ENST00000513159 MYOCDQ8IZQ8 938 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 MRPL4Q9BYD3 311 aaKnown RBP11.35□□□□□ -0.59
PTPN20-227ENST00000513159 CDT1Q9H211 546 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 KCNG1Q9UIX4 513 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 IPPQ9Y573 584 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 PCDHB2Q9Y5E7 798 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 STYXL1Q9Y6J8 313 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 SLC4A7Q9Y6M7 1214 aa11.35□□□□□ -0.59
PTPN20-227ENST00000513159 LCHNA4D1U4 455 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 SOX1O00570 391 aaPredicted RBP11.34□□□□□ -0.59
PTPN20-227ENST00000513159 EIF3DO15371 548 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTPN20-227ENST00000513159 EFCAB14O75071 495 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 UPP2O95045 317 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 GJB5O95377 273 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 LINC00271P0C7V0 271 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 FGFR1P11362 822 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 MYOGP15173 224 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
PTPN20-227ENST00000513159 ZSCAN20P17040 1043 aaPredicted RBP11.34□□□□□ -0.59
PTPN20-227ENST00000513159 PBX2P40425 430 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 HTRA4P83105 476 aaPredicted RBP11.34□□□□□ -0.59
PTPN20-227ENST00000513159 PSMD2Q13200 908 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 MORC3Q14149 939 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 SEZ6Q53EL9 994 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 ZBTB41Q5SVQ8 909 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 ISM2Q6H9L7 571 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 FAM117BQ6P1L5 589 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 SLC27A1Q6PCB7 646 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 ZPBP2Q6X784 338 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 RBM43Q6ZSC3 357 aaKnown RBP11.34□□□□□ -0.59
PTPN20-227ENST00000513159 HERC6Q8IVU3 1022 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 SLC17A8Q8NDX2 589 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 GSTCDQ8NEC7 633 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 ZNF689Q96CS4 500 aaPredicted RBP11.34□□□□□ -0.59
PTPN20-227ENST00000513159 HVCN1Q96D96 273 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 GSDMAQ96QA5 445 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 KCTD10Q9H3F6 313 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 NXF3Q9H4D5 531 aaKnown RBP11.34□□□□□ -0.59
PTPN20-227ENST00000513159 ELAC1Q9H777 363 aaKnown RBP11.34□□□□□ -0.59
PTPN20-227ENST00000513159 C1orf112Q9NSG2 853 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 EXOC1Q9NV70 894 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 TMEM63CQ9P1W3 806 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 KIAA1468Q9P260 1216 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms