RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	HFE2	Q6ZVN8	426 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	COLGALT2	Q8IYK4	626 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	C4orf32	Q8N8J7	132 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	MCPH1	Q8NEM0	835 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	RPGRIP1	Q96KN7	1286 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	PRIMPOL	Q96LW4	560 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	GIT1	Q9Y2X7	761 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ZDBF2	Q9HCK1	2354 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	MYO10	Q9HD67	2058 aa		13.94	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	INO80B-WBP1	J3KQ70	363 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	NRP1	O14786	923 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	C1R	P00736	705 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ARF4	P18085	180 aa	Predicted RBP	13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	U2AF2	P26368	475 aa	Known RBP eCLIP	13.93	□□□□□ -0.18	3e-9	■■□□□ 13.9
UBE2D3-231	ENST00000513098	HOXD11	P31277	338 aa	Predicted RBP	13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	MTHFR	P42898	656 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	PDIA5	Q14554	519 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	PTPN14	Q15678	1187 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	PPP4R3CP	Q6ZMV5	832 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	NOSTRIN	Q8IVI9	506 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	CCDC83	Q8IWF9	413 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	GPR65	Q8IYL9	337 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	RNF168	Q8IYW5	571 aa	Predicted RBP	13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	GSTCD	Q8NEC7	633 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	FAM193B	Q96PV7	902 aa	Predicted RBP	13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	EIF2A	Q9BY44	585 aa	Known RBP	13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	RNF39	Q9H2S5	420 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	FZD8	Q9H461	694 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	SSX2IP	Q9Y2D8	614 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	NR2E1	Q9Y466	385 aa		13.93	□□□□□ -0.18
UBE2D3-231	ENST00000513098	MED24	O75448	989 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	POMC	P01189	267 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	SOD2	P04179	222 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	OR52Z1	P0C646	297 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	FXR2	P51116	673 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	GUCY1B3	Q02153	619 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ATAT1	Q5SQI0	421 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	SLC27A1	Q6PCB7	646 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	HACE1	Q8IYU2	909 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	TMEM87A	Q8NBN3	555 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ERMN	Q8TAM6	284 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	AUTS2	Q8WXX7	1259 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	CPB2	Q96IY4	423 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	RIPOR3	Q96MK2	946 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	CCDC43	Q96MW1	224 aa	Known RBP	13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	GAD1	Q99259	594 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	GBP3	Q9H0R5	595 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	MIOS	Q9NXC5	875 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098	UST	Q9Y2C2	406 aa		13.92	□□□□□ -0.18
UBE2D3-231	ENST00000513098		A0A087WWV3	80 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	TMEM221	A6NGB7	291 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098		M0R296	226 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	PAPLN	O95428	1278 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	CYP11B2	P19099	503 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ATP2B1	P20020	1258 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	FOSB	P53539	338 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	SIGLEC14	Q08ET2	396 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ZNF174	Q15697	407 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	PTPN21	Q16825	1174 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	C8orf34	Q49A92	452 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	KIAA0319	Q5VV43	1072 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	KIAA1841	Q6NSI8	718 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	KLHL5	Q96PQ7	755 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	EMILIN2	Q9BXX0	1053 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	RHOBTB2	Q9BYZ6	727 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	MRPL17	Q9NRX2	175 aa	Known RBP	13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	CHST7	Q9NS84	486 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	MARCH5	Q9NX47	278 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	HES2	Q9Y543	173 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	STK24	Q9Y6E0	443 aa		13.91	□□□□□ -0.18
UBE2D3-231	ENST00000513098	USO1	O60763	962 aa	Known RBP	13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	NR1I2	O75469	434 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	CNP	P09543	421 aa	Known RBP	13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	EPCAM	P16422	314 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	CLCN4	P51793	760 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	TTC38	Q5R3I4	469 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	PADI6	Q6TGC4	694 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ZDHHC14	Q8IZN3	488 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ASIC4	Q96FT7	647 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ZFP42	Q96MM3	310 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	RPS6KC1	Q96S38	1066 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	APOL5	Q9BWW9	433 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	TRIM6	Q9C030	488 aa	Predicted RBP	13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	C2orf40	Q9H1Z8	148 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	POMK	Q9H5K3	350 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	RXFP1	Q9HBX9	757 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	GPRC5C	Q9NQ84	441 aa		13.9	□□□□□ -0.18
UBE2D3-231	ENST00000513098	ACKR2	O00590	384 aa		13.89	□□□□□ -0.19
UBE2D3-231	ENST00000513098	B4GALT5	O43286	388 aa		13.89	□□□□□ -0.19
UBE2D3-231	ENST00000513098	KLRC2	P26717	231 aa		13.89	□□□□□ -0.19
UBE2D3-231	ENST00000513098	MLH1	P40692	756 aa		13.89	□□□□□ -0.19
UBE2D3-231	ENST00000513098	NAMPT	P43490	491 aa		13.89	□□□□□ -0.19
UBE2D3-231	ENST00000513098	TOB1	P50616	345 aa	Predicted RBP	13.89	□□□□□ -0.19
UBE2D3-231	ENST00000513098	SCNN1G	P51170	649 aa		13.89	□□□□□ -0.19
UBE2D3-231	ENST00000513098	DSG1	Q02413	1049 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms