RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.38□□□□□ -0.75
MSH3-203ENST00000512531 NCOR1O75376 2440 aa10.38□□□□□ -0.75
MSH3-203ENST00000512531 A0A0U1RQG5 324 aaPredicted RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 TTC26A0AVF1 554 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 FRMD3A2A2Y4 597 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 EIF3CLB5ME19 914 aaKnown RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 PDXKO00764 312 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 SLC16A3O15427 465 aaKnown RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 ATP8B1O43520 1251 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 LGR5O75473 907 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 ERLIN1O75477 346 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 CYP11B2P19099 503 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 SLC12A3P55017 1021 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 MARSP56192 900 aaKnown RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 EHHADHQ08426 723 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 NCBP1Q09161 790 aaKnown RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 GPS2Q13227 327 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 ACVR2BQ13705 512 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 GRIN2CQ14957 1233 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 EPHA7Q15375 998 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 MEA1Q16626 185 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 EML3Q32P44 896 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 MAP7D1Q3KQU3 841 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 ZNF569Q5MCW4 686 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 SNRNP48Q6IEG0 339 aaKnown RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 PSRC1Q6PGN9 363 aaPredicted RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 TRIM65Q6PJ69 517 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 FRMD5Q7Z6J6 570 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 CATSPER3Q86XQ3 398 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 TMEM199Q8N511 208 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 GPR161Q8N6U8 529 aaKnown RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 ARMC2Q8NEN0 867 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 ATXN2LQ8WWM7 1075 aaKnown RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 SLC5A5Q92911 643 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 VTI1AQ96AJ9 217 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 TIFAQ96CG3 184 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 DNAJC19Q96DA6 116 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 IWS1Q96ST2 819 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 EIF3CQ99613 913 aaKnown RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 EIF2AK1Q9BQI3 630 aaKnown RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 MMRN2Q9H8L6 949 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 MRPL44Q9H9J2 332 aaKnown RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 SLC38A10Q9HBR0 1119 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 TBC1D22BQ9NU19 505 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 DNAAF2Q9NVR5 837 aaKnown RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 CEP72Q9P209 647 aa10.37□□□□□ -0.75
MSH3-203ENST00000512531 BZW2Q9Y6E2 419 aaKnown RBP10.37□□□□□ -0.75
MSH3-203ENST00000512531 ARHGEF35A5YM69 484 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 E9PMD0 336 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 ARVCFO00192 962 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 TLR3O15455 904 aaKnown RBP10.36□□□□□ -0.75
MSH3-203ENST00000512531 MSH4O15457 936 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 AKR1B10O60218 316 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 LZTS3O60299 673 aaPredicted RBP10.36□□□□□ -0.75
MSH3-203ENST00000512531 TACC1O75410 805 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 CABYRO75952 493 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 ANXA13P27216 316 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 PMS1P54277 932 aaKnown RBP10.36□□□□□ -0.75
MSH3-203ENST00000512531 SNRPFP62306 86 aaKnown RBP10.36□□□□□ -0.75
MSH3-203ENST00000512531 GOLGA8FQ08AF8 430 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 GOLGA8DPQ0D2H9 430 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 CETN1Q12798 172 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 ADAM9Q13443 819 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 RAB30Q15771 203 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 IFI16Q16666 785 aaKnown RBP10.36□□□□□ -0.75
MSH3-203ENST00000512531 KNOP1Q1ED39 458 aaKnown RBP10.36□□□□□ -0.75
MSH3-203ENST00000512531 SWI5Q1ZZU3 235 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 TMEM240Q5SV17 173 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 CCDC122Q5T0U0 273 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 C10orf76Q5T2E6 689 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 LCE2DQ5TA82 110 aaPredicted RBP10.36□□□□□ -0.75
MSH3-203ENST00000512531 TMCO3Q6UWJ1 677 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 IRF2BP1Q8IU81 584 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 SIX5Q8N196 739 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 RABGGTAQ92696 567 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 WNT2BQ93097 391 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.36□□□□□ -0.759e-12■■□□□ 13.6
MSH3-203ENST00000512531 DESI2Q9BSY9 194 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 MTIF3Q9H2K0 278 aaKnown RBP10.36□□□□□ -0.75
MSH3-203ENST00000512531 PARVGQ9HBI0 331 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 OLFML3Q9NRN5 406 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 TYW1Q9NV66 732 aaKnown RBP10.36□□□□□ -0.75
MSH3-203ENST00000512531 ARMCX3Q9UH62 379 aaPredicted RBP10.36□□□□□ -0.75
MSH3-203ENST00000512531 CDC23Q9UJX2 597 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 MYO6Q9UM54 1294 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 MRFAP1Q9Y605 127 aa10.36□□□□□ -0.75
MSH3-203ENST00000512531 EYSQ5T1H1 3165 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 MYO9BQ13459 2157 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 CDH23Q9H251 3354 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 SSU72P8A0A1W2PR75 194 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 ANO9A1A5B4 782 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 CTAGE15A4D2H0 777 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 TNFRSF10AO00220 468 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 MAFGO15525 162 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 PRMT3O60678 531 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 MED24O75448 989 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 GCNT3O95395 438 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 CD4P01730 458 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 ASGR1P07306 291 aa10.35□□□□□ -0.75
MSH3-203ENST00000512531 CTAGE8P0CG41 777 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms