RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDX41-214ENST00000512334 RSPH1Q8WYR4 309 aa17.53■□□□□ 0.4
DDX41-214ENST00000512334 ZNF558Q96NG5 402 aa17.53■□□□□ 0.4
DDX41-214ENST00000512334 ADPGKQ9BRR6 497 aa17.53■□□□□ 0.4
DDX41-214ENST00000512334 GBP3Q9H0R5 595 aa17.53■□□□□ 0.4
DDX41-214ENST00000512334 NXF3Q9H4D5 531 aaKnown RBP17.53■□□□□ 0.4
DDX41-214ENST00000512334 ZHX3Q9H4I2 956 aa17.53■□□□□ 0.4
DDX41-214ENST00000512334 UBN1Q9NPG3 1134 aa17.53■□□□□ 0.4
DDX41-214ENST00000512334 TRANK1O15050 2925 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 PHLPP2Q6ZVD8 1323 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 ZC3H11AO75152 810 aaKnown RBP eCLIP17.52■□□□□ 0.4
DDX41-214ENST00000512334 FGF18O76093 207 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 FAM13AO94988 1023 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 DDIT3P35638 169 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 SMTNP53814 917 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 DNM1Q05193 864 aaKnown RBP17.52■□□□□ 0.4
DDX41-214ENST00000512334 ARSHQ5FYA8 562 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 KCNT2Q6UVM3 1135 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 CCDC73Q6ZRK6 1079 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 SPPL3Q8TCT6 385 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 POF1BQ8WVV4 589 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 REEP2Q9BRK0 252 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 PANK2Q9BZ23 570 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 RNF39Q9H2S5 420 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 PDZD7Q9H5P4 517 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 TBC1D13Q9NVG8 400 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 STK17AQ9UEE5 414 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 KCNG1Q9UIX4 513 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 CFAP45Q9UL16 551 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 ODF2LQ9ULJ1 636 aa17.52■□□□□ 0.4
DDX41-214ENST00000512334 RBM19Q9Y4C8 960 aaKnown RBP17.52■□□□□ 0.4
DDX41-214ENST00000512334 TBCAO75347 108 aaKnown RBP17.51■□□□□ 0.39
DDX41-214ENST00000512334 BRD1O95696 1058 aa17.51■□□□□ 0.39
DDX41-214ENST00000512334 EDN1P05305 212 aa17.51■□□□□ 0.39
DDX41-214ENST00000512334 AKAP5P24588 427 aa17.51■□□□□ 0.39
DDX41-214ENST00000512334 MLH1P40692 756 aa17.51■□□□□ 0.39
DDX41-214ENST00000512334 STAT6P42226 847 aa17.51■□□□□ 0.39
DDX41-214ENST00000512334 ALDH7A1P49419 539 aaKnown RBP17.51■□□□□ 0.39
DDX41-214ENST00000512334 NT5DC1Q5TFE4 455 aa17.51■□□□□ 0.39
DDX41-214ENST00000512334 ATF7IP2Q5U623 682 aa17.51■□□□□ 0.39
DDX41-214ENST00000512334 ATL3Q6DD88 541 aa17.51■□□□□ 0.39
DDX41-214ENST00000512334 KCNG4Q8TDN1 519 aa17.51■□□□□ 0.39
DDX41-214ENST00000512334 FAM193BQ96PV7 902 aaPredicted RBP17.51■□□□□ 0.39
DDX41-214ENST00000512334 NSUN3Q9H649 340 aaKnown RBP17.51■□□□□ 0.39
DDX41-214ENST00000512334 TMEM134Q9H6X4 195 aa17.51■□□□□ 0.39
DDX41-214ENST00000512334 LARSQ9P2J5 1176 aaKnown RBP17.51■□□□□ 0.39
DDX41-214ENST00000512334 ARHGAP28Q9P2N2 729 aa17.51■□□□□ 0.39
DDX41-214ENST00000512334 KANSL3Q9P2N6 904 aa17.51■□□□□ 0.39
DDX41-214ENST00000512334 PARP2Q9UGN5 583 aa17.51■□□□□ 0.39
DDX41-214ENST00000512334 PLXNA4Q9HCM2 1894 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 CUTAO60888 179 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 POMCP01189 267 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 PPM1AP35813 382 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 ME1P48163 572 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 AFF1P51825 1210 aaKnown RBP17.5■□□□□ 0.39
DDX41-214ENST00000512334 BCAR1P56945 870 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 STRN3Q13033 797 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 GIT2Q14161 759 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 TCEAL5Q5H9L2 206 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 MYCT1Q8N699 235 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 PDILTQ8N807 584 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 MICAL1Q8TDZ2 1067 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 SPIRE2Q8WWL2 714 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 GAD1Q99259 594 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 MRPL4Q9BYD3 311 aaKnown RBP17.5■□□□□ 0.39
DDX41-214ENST00000512334 NRDE2Q9H7Z3 1164 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 SPG21Q9NZD8 308 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 THEGQ9P2T0 379 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 GIT1Q9Y2X7 761 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 PRUNE2Q8WUY3 3088 aa17.5■□□□□ 0.39
DDX41-214ENST00000512334 ARL5CA6NH57 179 aa17.49■□□□□ 0.39
DDX41-214ENST00000512334 NT5C1B-RDH14C9J2C7 533 aa17.49■□□□□ 0.39
DDX41-214ENST00000512334 DNAJB1P25685 340 aa17.49■□□□□ 0.39
DDX41-214ENST00000512334 KRT17Q04695 432 aa17.49■□□□□ 0.39
DDX41-214ENST00000512334 UBE3AQ05086 875 aa17.49■□□□□ 0.39
DDX41-214ENST00000512334 DCAF4L1Q3SXM0 396 aa17.49■□□□□ 0.39
DDX41-214ENST00000512334 EEF1DP3Q658K8 133 aa17.49■□□□□ 0.39
DDX41-214ENST00000512334 SV2BQ7L1I2 683 aa17.49■□□□□ 0.39
DDX41-214ENST00000512334 APBB1IPQ7Z5R6 666 aaPredicted RBP17.49■□□□□ 0.39
DDX41-214ENST00000512334 TMEM161BQ8NDZ6 487 aa17.49■□□□□ 0.39
DDX41-214ENST00000512334 ZFP42Q96MM3 310 aa17.49■□□□□ 0.39
DDX41-214ENST00000512334 NTPCRQ9BSD7 190 aaKnown RBP17.49■□□□□ 0.39
DDX41-214ENST00000512334 PARVGQ9HBI0 331 aa17.49■□□□□ 0.39
DDX41-214ENST00000512334 KLK14Q9P0G3 267 aa17.49■□□□□ 0.39
DDX41-214ENST00000512334 PUF60Q9UHX1 559 aaKnown RBP17.49■□□□□ 0.39
DDX41-214ENST00000512334 ZDHHC9Q9Y397 364 aa17.49■□□□□ 0.39
DDX41-214ENST00000512334 A0A087X0B3 334 aa17.48■□□□□ 0.39
DDX41-214ENST00000512334 H0YCG3 227 aa17.48■□□□□ 0.39
DDX41-214ENST00000512334 K7ENM7 598 aa17.48■□□□□ 0.39
DDX41-214ENST00000512334 SCNN1GP51170 649 aa17.48■□□□□ 0.39
DDX41-214ENST00000512334 CAMK1Q14012 370 aa17.48■□□□□ 0.39
DDX41-214ENST00000512334 EP400NLQ6ZTU2 488 aa17.48■□□□□ 0.39
DDX41-214ENST00000512334 DYMQ7RTS9 669 aa17.48■□□□□ 0.39
DDX41-214ENST00000512334 TAS1R3Q7RTX0 852 aa17.48■□□□□ 0.39
DDX41-214ENST00000512334 ZNF280BQ86YH2 543 aa17.48■□□□□ 0.39
DDX41-214ENST00000512334 SLC39A11Q8N1S5 342 aa17.48■□□□□ 0.39
DDX41-214ENST00000512334 MRPS27Q92552 414 aaKnown RBP17.48■□□□□ 0.39
DDX41-214ENST00000512334 TMEM169Q96HH4 297 aa17.48■□□□□ 0.39
DDX41-214ENST00000512334 RPS6KC1Q96S38 1066 aa17.48■□□□□ 0.39
DDX41-214ENST00000512334 ACO2Q99798 780 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms