RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 TPRP12270 2363 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 IGLV3-22A0A075B6J6 115 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 A0A087X0B3 334 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 CLASP2O75122 1294 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 SMC2O95347 1197 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 SDHBP21912 280 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 UBA7P41226 1012 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 NLRP12P59046 1061 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 GRIK4Q16099 956 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 VARS2Q5ST30 1063 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 USP49Q70CQ1 688 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 CEP57L1Q8IYX8 460 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 PDLIM2Q96JY6 352 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 TMX1Q9H3N1 280 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 KCNK12Q9HB15 430 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 NGRNQ9NPE2 291 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 KBTBD4Q9NVX7 518 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 TRPV2Q9Y5S1 764 aa11.63□□□□□ -0.55
PDLIM5-217ENST00000512274 KDM3AQ9Y4C1 1321 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 BAHCC1Q9P281 2608 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 M0QZ92 97 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 MEIS1O00470 390 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 IKBKBO14920 756 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 MGEA5O60502 916 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 FGFR1P11362 822 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 LAG3P18627 525 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 PLCB3Q01970 1234 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 SPIRE1Q08AE8 756 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 TBC1D8BQ0IIM8 1120 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 NEDD9Q14511 834 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 ACAP1Q15027 740 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 TMEM119Q4V9L6 283 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 CEP55Q53EZ4 464 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 MARCH8Q5T0T0 291 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 IER5Q5VY09 327 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 PCNX4Q63HM2 1172 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 KIAA1841Q6NSI8 718 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 METTL7BQ6UX53 244 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 TMC5Q6UXY8 1006 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 C1orf210Q8IVY1 113 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 MLKLQ8NB16 471 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 RSAD2Q8WXG1 361 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 ACSF2Q96CM8 615 aaPredicted RBP11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 PAGE5Q96GU1 130 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 PPP1R9BQ96SB3 815 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 MMTAG2Q9BU76 263 aaKnown RBP11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 NT5C3AQ9H0P0 336 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 TBC1D17Q9HA65 648 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 SERTAD1Q9UHV2 236 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 LZTS1Q9Y250 596 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 USTQ9Y2C2 406 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 PCDHA5Q9Y5H7 936 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 ZFHX4Q86UP3 3567 aa11.62□□□□□ -0.55
PDLIM5-217ENST00000512274 EPG5Q9HCE0 2579 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 POTEMA6NI47 508 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 FAM86B1E9PN63 330 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 MAFGO15525 162 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 STAM2O75886 525 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 FAM86B2P0C5J1 330 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 EPCAMP16422 314 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 TCF7P36402 384 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 ZNF165P49910 485 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 KRT17Q04695 432 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 DPYDQ12882 1025 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 MORC3Q14149 939 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 SMC1AQ14683 1233 aaKnown RBP11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 KCNB1Q14721 858 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 IQCB1Q15051 598 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 GNPTABQ3T906 1256 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 ANO6Q4KMQ2 910 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 COBLL1Q53SF7 1204 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 POTEGQ6S5H5 508 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 B3GNT9Q6UX72 402 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 CABP7Q86V35 215 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 COL26A1Q96A83 441 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 CALML4Q96GE6 196 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 ADAM2Q99965 735 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 RTKNQ9BST9 563 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 LRRC27Q9C0I9 530 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 TTC12Q9H892 705 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 LRWD1Q9UFC0 647 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 DACH1Q9UI36 760 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 USP18Q9UMW8 372 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 PCDHA12Q9UN75 941 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 C2orf16Q68DN1 1984 aa11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 MAP1BP46821 2468 aaKnown RBP11.61□□□□□ -0.55
PDLIM5-217ENST00000512274 MBLAC1A4D2B0 266 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 C2orf71A6NGG8 1288 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 CXCL14O95715 111 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 KCNA4P22459 653 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 MRPS9P82933 396 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 AMPD3Q01432 767 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 CCDC173Q0VFZ6 552 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 PPP2R5CQ13362 524 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 ZRSR1Q15695 479 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 PPM1JQ5JR12 505 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 RRAGBQ5VZM2 374 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 KRT79Q5XKE5 535 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 HAUS3Q68CZ6 603 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 SARM1Q6SZW1 724 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms