RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 SUCLA2Q9P2R7 463 aaPredicted RBP11.54□□□□□ -0.56
CPNE4-209ENST00000512055 KCNG1Q9UIX4 513 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 TFR2Q9UP52 801 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 CASP8Q14790 479 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 NAALADL2Q58DX5 795 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 GINS4Q9BRT9 223 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 SMYD2Q9NRG4 433 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 DNAJC12Q9UKB3 198 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 CAB39Q9Y376 341 aaPredicted RBP11.54□□□□□ -0.56
CPNE4-209ENST00000512055 A0A087X0B3 334 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 ATP8B1O43520 1251 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 ATP1A1P05023 1023 aaKnown RBP11.54□□□□□ -0.56
CPNE4-209ENST00000512055 GCLMP48507 274 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 ART3Q13508 389 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 SLC12A1Q13621 1099 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 HIF1AQ16665 826 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 PPP4R4Q6NUP7 873 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 NANOGNBQ7Z5D8 188 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 STAMBPL1Q96FJ0 436 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 OSBPL9Q96SU4 736 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 NRBP2Q9NSY0 501 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 GOLGA8QA0A0J9YX86 632 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 GOLGA8OA6NCC3 632 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 GOLGA8NF8WBI6 632 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 SLC16A4O15374 487 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 TRIM49P0CI25 452 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 TRIM49CP0CI26 452 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 NYAP1Q6ZVC0 841 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 ZNF653Q96CK0 615 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 ZBTB10Q96DT7 871 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 UPF3AQ9H1J1 476 aaKnown RBP11.54□□□□□ -0.56
CPNE4-209ENST00000512055 PTPN22Q9Y2R2 807 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 MRC1P22897 1456 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 NALCNQ8IZF0 1738 aa11.54□□□□□ -0.56
CPNE4-209ENST00000512055 ADCY3O60266 1144 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 S100A9P06702 114 aaKnown RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 SRGNP10124 158 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 SUPT20HL1Q3ZLR7 823 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 ATG16L1Q676U5 607 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 PDXDC2PQ6P474 469 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 GSPT2Q8IYD1 628 aaKnown RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 SERPINB3P29508 390 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 NSFP46459 744 aaKnown RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 PTK2Q05397 1052 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 SNRNP48Q6IEG0 339 aaKnown RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 CC2D1AQ6P1N0 951 aaPredicted RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 TAB3Q8N5C8 712 aaPredicted RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 TMEM39BQ9GZU3 492 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 C10orf88Q9H8K7 445 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 TYW1Q9NV66 732 aaKnown RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 KCNJ6P48051 423 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 CCDC149Q6ZUS6 474 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 PLEKHM3Q6ZWE6 761 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 ELOA2Q8IYF1 753 aaPredicted RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 OPTNQ96CV9 577 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 TUBB6Q9BUF5 446 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 KLHL31Q9H511 634 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 RNF146Q9NTX7 359 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 EHD2Q9NZN4 543 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 CACNA1FO60840 1977 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 PCP4L1A6NKN8 68 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 H0YCG3 227 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 SERPINB1P30740 379 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 TJAP1Q5JTD0 557 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 BTNL9Q6UXG8 535 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 CCDC117Q8IWD4 279 aaPredicted RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 FBXL13Q8NEE6 735 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 MAGOHBQ96A72 148 aaKnown RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 PRMT6Q96LA8 375 aaPredicted RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 REEP2Q9BRK0 252 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 SMAPO00193 183 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 PGRMC1O00264 195 aaKnown RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 PSMD14O00487 310 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 FOXP2O15409 715 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 ATF7P17544 494 aaPredicted RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 KRT17Q04695 432 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 CYLC2Q14093 348 aaPredicted RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 MIS18BP1Q6P0N0 1132 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 CATSPER3Q86XQ3 398 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 DAGLBQ8NCG7 672 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 RNF217Q8TC41 542 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 SERPINI1Q99574 410 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 ZCCHC17Q9NP64 241 aaKnown RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 ZNF70Q9UC06 446 aaPredicted RBP11.53□□□□□ -0.56
CPNE4-209ENST00000512055 PCDHB4Q9Y5E5 795 aa11.53□□□□□ -0.56
CPNE4-209ENST00000512055 INO80B-WBP1J3KQ70 363 aa11.52□□□□□ -0.56
CPNE4-209ENST00000512055 MARK3P27448 753 aa11.52□□□□□ -0.56
CPNE4-209ENST00000512055 KCTD2Q14681 263 aa11.52□□□□□ -0.56
CPNE4-209ENST00000512055 RSAD2Q8WXG1 361 aa11.52□□□□□ -0.56
CPNE4-209ENST00000512055 INO80BQ9C086 356 aaPredicted RBP11.52□□□□□ -0.56
CPNE4-209ENST00000512055 NCF2P19878 526 aaPredicted RBP11.52□□□□□ -0.57
CPNE4-209ENST00000512055 TMOD1P28289 359 aa11.52□□□□□ -0.57
CPNE4-209ENST00000512055 OSTNP61366 133 aa11.52□□□□□ -0.57
CPNE4-209ENST00000512055 NNTQ13423 1086 aa11.52□□□□□ -0.57
CPNE4-209ENST00000512055 MUM1L1Q5H9M0 696 aa11.52□□□□□ -0.57
CPNE4-209ENST00000512055 AHI1Q8N157 1196 aa11.52□□□□□ -0.57
CPNE4-209ENST00000512055 XRN1Q8IZH2 1706 aaKnown RBP11.52□□□□□ -0.57
CPNE4-209ENST00000512055 IQCA1LA6NCM1 817 aa11.52□□□□□ -0.57
CPNE4-209ENST00000512055 DDTLA6NHG4 134 aaPredicted RBP11.52□□□□□ -0.57
CPNE4-209ENST00000512055 IL1R1P14778 569 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms