RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 ATP2A2P16615 1042 aaKnown RBP9.97□□□□□ -0.81
NR1I3-228ENST00000511676 SMPD1P17405 629 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 POU3F3P20264 500 aaPredicted RBP9.97□□□□□ -0.81
NR1I3-228ENST00000511676 NR2F2P24468 414 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 HOXD13P35453 343 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 ARL2P36404 184 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 NPTX2P47972 431 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 KCNJ6P48051 423 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 CDC42EP1Q00587 391 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 MTERF2Q49AM1 385 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 FIGNQ5HY92 759 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 FAM102BQ5T8I3 360 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 SMYD5Q6GMV2 418 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 FAM43BQ6ZT52 329 aaPredicted RBP9.97□□□□□ -0.81
NR1I3-228ENST00000511676 DRC7Q8IY82 874 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 GLIS3Q8NEA6 775 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 OR6J1Q8NGC5 347 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 PSPC1Q8WXF1 523 aaKnown RBP9.97□□□□□ -0.81
NR1I3-228ENST00000511676 ERGIC2Q96RQ1 377 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 C16orf70Q9BSU1 422 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 FGFBP2Q9BYJ0 223 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 PPP1R12CQ9BZL4 782 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 POLR3FQ9H1D9 316 aaPredicted RBP9.97□□□□□ -0.81
NR1I3-228ENST00000511676 C2orf40Q9H1Z8 148 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 TMEM134Q9H6X4 195 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 KMT5AQ9NQR1 393 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 INTS13Q9NVM9 706 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 TBC1D7Q9P0N9 293 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 CXXC1Q9P0U4 656 aaPredicted RBP9.97□□□□□ -0.81
NR1I3-228ENST00000511676 FAM50BQ9Y247 325 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.97□□□□□ -0.81
NR1I3-228ENST00000511676 WDR81Q562E7 1941 aa9.97□□□□□ -0.81
NR1I3-228ENST00000511676 GTPBP10A4D1E9 387 aaKnown RBP9.96□□□□□ -0.82
NR1I3-228ENST00000511676 ZBTB42B2RXF5 422 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 H3BRB1 525 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 N4BP3O15049 544 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 MAP3K13O43283 966 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 TGFB1I1O43294 461 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 NR3C1P04150 777 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 RPLP2P05387 115 aaKnown RBP9.96□□□□□ -0.82
NR1I3-228ENST00000511676 TPM1P09493 284 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 EPB41P11171 864 aaKnown RBP9.96□□□□□ -0.82
NR1I3-228ENST00000511676 NMT1P30419 496 aaKnown RBP9.96□□□□□ -0.82
NR1I3-228ENST00000511676 PSMC2P35998 433 aaKnown RBP9.96□□□□□ -0.82
NR1I3-228ENST00000511676 MTIF2P46199 727 aaKnown RBP9.96□□□□□ -0.82
NR1I3-228ENST00000511676 PEX3P56589 373 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 TBX2Q13207 712 aaPredicted RBP9.96□□□□□ -0.82
NR1I3-228ENST00000511676 ADAM9Q13443 819 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 TFDP1Q14186 410 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 SKIV2LQ15477 1246 aaKnown RBP9.96□□□□□ -0.82
NR1I3-228ENST00000511676 FKBP15Q5T1M5 1219 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 CDCA2Q69YH5 1023 aaPredicted RBP9.96□□□□□ -0.82
NR1I3-228ENST00000511676 CXCL17Q6UXB2 119 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 TRIM59Q8IWR1 403 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 CCDC112Q8NEF3 446 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 AFG1LQ8WV93 481 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 CCDC51Q96ER9 411 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 NAP1L5Q96NT1 182 aaPredicted RBP9.96□□□□□ -0.82
NR1I3-228ENST00000511676 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 UHRF1Q96T88 793 aaPredicted RBP9.96□□□□□ -0.82
NR1I3-228ENST00000511676 NUP58Q9BVL2 599 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 EDEM3Q9BZQ6 932 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 TUT1Q9H6E5 874 aaKnown RBP9.96□□□□□ -0.82
NR1I3-228ENST00000511676 KIAA1586Q9HCI6 787 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 AGPAT3Q9NRZ7 376 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 TBX20Q9UMR3 447 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 FRMD4BQ9Y2L6 1034 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 HCN4Q9Y3Q4 1203 aa9.96□□□□□ -0.82
NR1I3-228ENST00000511676 SFI1A8K8P3 1242 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 PMM2O15305 246 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 PRPF6O94906 941 aaKnown RBP9.95□□□□□ -0.82
NR1I3-228ENST00000511676 C22orf31O95567 290 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 GARTP22102 1010 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 TMOD1P28289 359 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 ARID5BQ14865 1188 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 PCBP1Q15365 356 aaKnown RBP eCLIP9.95□□□□□ -0.82
NR1I3-228ENST00000511676 PUS10Q3MIT2 529 aaKnown RBP9.95□□□□□ -0.82
NR1I3-228ENST00000511676 CCDC40Q4G0X9 1142 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 MIIPQ5JXC2 388 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 ZPBP2Q6X784 338 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 USP37Q86T82 979 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 ZSCAN30Q86W11 494 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 CNGA4Q8IV77 575 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 NELFCDQ8IXH7 590 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 SYCP3Q8IZU3 236 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 LINC01465Q8N7H1 131 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 DEPTORQ8TB45 409 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 COPS5Q92905 334 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 ZBED2Q9BTP6 218 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 NOC4LQ9BVI4 516 aaKnown RBP9.95□□□□□ -0.82
NR1I3-228ENST00000511676 ARMCX3Q9UH62 379 aaPredicted RBP9.95□□□□□ -0.82
NR1I3-228ENST00000511676 TRPC6Q9Y210 931 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 ZKSCAN5Q9Y2L8 839 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 TELO2Q9Y4R8 837 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 STYXL1Q9Y6J8 313 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 NRCAMQ92823 1304 aa9.95□□□□□ -0.82
NR1I3-228ENST00000511676 MYH9P35579 1960 aaKnown RBP9.95□□□□□ -0.82
NR1I3-228ENST00000511676 MCM3APO60318 1980 aa9.94□□□□□ -0.82
NR1I3-228ENST00000511676 DOCK5Q9H7D0 1870 aa9.94□□□□□ -0.82
NR1I3-228ENST00000511676 LTBP2Q14767 1821 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms