RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 EIF2AK2P19525 551 aaKnown RBP13.94□□□□□ -0.18
HMGB2-205ENST00000511316 LSP1P33241 339 aa13.94□□□□□ -0.18
HMGB2-205ENST00000511316 GJA9P57773 515 aa13.94□□□□□ -0.18
HMGB2-205ENST00000511316 MRPS9P82933 396 aaKnown RBP13.94□□□□□ -0.18
HMGB2-205ENST00000511316 TRAF1Q13077 416 aa13.94□□□□□ -0.18
HMGB2-205ENST00000511316 DUSP28Q4G0W2 176 aa13.94□□□□□ -0.18
HMGB2-205ENST00000511316 ZCWPW2Q504Y3 356 aa13.94□□□□□ -0.18
HMGB2-205ENST00000511316 TTMPQ5BVD1 217 aa13.94□□□□□ -0.18
HMGB2-205ENST00000511316 NECAB2Q7Z6G3 386 aa13.94□□□□□ -0.18
HMGB2-205ENST00000511316 ZC3H3Q8IXZ2 948 aaKnown RBP13.94□□□□□ -0.18
HMGB2-205ENST00000511316 CCDC43Q96MW1 224 aaKnown RBP13.94□□□□□ -0.18
HMGB2-205ENST00000511316 NCAPGQ9BPX3 1015 aa13.94□□□□□ -0.18
HMGB2-205ENST00000511316 SLITRK6Q9H5Y7 841 aa13.94□□□□□ -0.18
HMGB2-205ENST00000511316 PSTPIP2Q9H939 334 aa13.94□□□□□ -0.18
HMGB2-205ENST00000511316 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.94□□□□□ -0.188e-18■■□□□ 13.8
HMGB2-205ENST00000511316 SZT2Q5T011 3432 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 LRRC37A2A6NM11 1700 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 CEP290O15078 2479 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 MYMKA6NI61 221 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 H0YHG0 523 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 MYZAPP0CAP1 466 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 MYBP10242 640 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 CLK2P49760 499 aaKnown RBP13.93□□□□□ -0.18
HMGB2-205ENST00000511316 NPEPPSP55786 919 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 EIF3BP55884 814 aaKnown RBP13.93□□□□□ -0.18
HMGB2-205ENST00000511316 TNFAIP2Q03169 654 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 PGM5Q15124 567 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 RPS6KA1Q15418 735 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 ASIC2Q16515 512 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 FAM26FQ5R3K3 315 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 AGBL2Q5U5Z8 902 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 MAATS1Q7Z4T9 603 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 GSPT2Q8IYD1 628 aaKnown RBP13.93□□□□□ -0.18
HMGB2-205ENST00000511316 USP38Q8NB14 1042 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 SNX29Q8TEQ0 813 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 ZFP91Q96JP5 570 aaPredicted RBP13.93□□□□□ -0.18
HMGB2-205ENST00000511316 INPP4AQ96PE3 977 aaPredicted RBP13.93□□□□□ -0.18
HMGB2-205ENST00000511316 MYCBPQ99417 103 aaPredicted RBP13.93□□□□□ -0.18
HMGB2-205ENST00000511316 WDR11Q9BZH6 1224 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 EPB41L5Q9HCM4 733 aa13.93□□□□□ -0.18
HMGB2-205ENST00000511316 PLEKP08567 350 aaPredicted RBP13.92□□□□□ -0.18
HMGB2-205ENST00000511316 CST5P28325 142 aaPredicted RBP13.92□□□□□ -0.18
HMGB2-205ENST00000511316 GBP1P32455 592 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 MDH1P40925 334 aaKnown RBP13.92□□□□□ -0.18
HMGB2-205ENST00000511316 MATR3P43243 847 aaKnown RBP eCLIP13.92□□□□□ -0.18
HMGB2-205ENST00000511316 SP2Q02086 613 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 GUCY2DQ02846 1103 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 KLHL30Q0D2K2 578 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 TEX2Q8IWB9 1127 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 TRIM59Q8IWR1 403 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 ARRDC4Q8NCT1 418 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 CCDC26Q8TAB7 109 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 DDX12PQ92771 950 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 DRC1Q96MC2 740 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 GDAP1L1Q96MZ0 367 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 NAP1L3Q99457 506 aaPredicted RBP13.92□□□□□ -0.18
HMGB2-205ENST00000511316 PLIN2Q99541 437 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 C11orf49Q9H6J7 331 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 CNOT10Q9H9A5 744 aaKnown RBP13.92□□□□□ -0.18
HMGB2-205ENST00000511316 TMEM59LQ9UK28 342 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 Q9Y3F1 56 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 CETN3O15182 167 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 EDIL3O43854 480 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 PALMO75781 387 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 TXKP42681 527 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 USP11P51784 963 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 GFPT1Q06210 699 aaPredicted RBP13.92□□□□□ -0.18
HMGB2-205ENST00000511316 STXBP2Q15833 593 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 KCNA10Q16322 511 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 PTGISQ16647 500 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 ARHGEF16Q5VV41 709 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 TSEN2Q8NCE0 465 aaKnown RBP13.92□□□□□ -0.18
HMGB2-205ENST00000511316 HDAC7Q8WUI4 952 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 COPS5Q92905 334 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 PNMA5Q96PV4 448 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 BCAS3Q9H6U6 928 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 METTL14Q9HCE5 456 aaKnown RBP13.92□□□□□ -0.18
HMGB2-205ENST00000511316 TFR2Q9UP52 801 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 PHF24Q9UPV7 400 aa13.92□□□□□ -0.18
HMGB2-205ENST00000511316 TMCO5BA8MYB1 307 aa13.91□□□□□ -0.18
HMGB2-205ENST00000511316 PGRMC1O00264 195 aaKnown RBP13.91□□□□□ -0.18
HMGB2-205ENST00000511316 MRPL12P52815 198 aaKnown RBP13.91□□□□□ -0.18
HMGB2-205ENST00000511316 UBE2SQ16763 222 aa13.91□□□□□ -0.18
HMGB2-205ENST00000511316 LRRC26Q2I0M4 334 aa13.91□□□□□ -0.18
HMGB2-205ENST00000511316 KIAA0753Q2KHM9 967 aa13.91□□□□□ -0.18
HMGB2-205ENST00000511316 FRMD5Q7Z6J6 570 aa13.91□□□□□ -0.18
HMGB2-205ENST00000511316 CRYGNQ8WXF5 182 aa13.91□□□□□ -0.18
HMGB2-205ENST00000511316 FAM114A2Q9NRY5 505 aa13.91□□□□□ -0.18
HMGB2-205ENST00000511316 NFU1Q9UMS0 254 aa13.91□□□□□ -0.18
HMGB2-205ENST00000511316 ALPK3Q96L96 1907 aa13.91□□□□□ -0.18
HMGB2-205ENST00000511316 DYNC1LI2O43237 492 aaPredicted RBP13.9□□□□□ -0.18
HMGB2-205ENST00000511316 PAEPP09466 180 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 CCDC172P0C7W6 258 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 PRKCIP41743 596 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 LIG3P49916 1009 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 BEX3Q00994 111 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 SLC7A5Q01650 507 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 IFFO1Q0D2I5 559 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 COASYQ13057 564 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 SNX17Q15036 470 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms