RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 CDR2LQ86X02 465 aaPredicted RBP13.35□□□□□ -0.27
CHFR-208ENST00000511001 MRPL43Q8N983 215 aaKnown RBP13.35□□□□□ -0.27
CHFR-208ENST00000511001 URGCPQ8TCY9 931 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 TMEM169Q96HH4 297 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 MMTAG2Q9BU76 263 aaKnown RBP13.35□□□□□ -0.27
CHFR-208ENST00000511001 GBP3Q9H0R5 595 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 FZD8Q9H461 694 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 POLD4Q9HCU8 107 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 LRWD1Q9UFC0 647 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 KIF3AQ9Y496 699 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 HES2Q9Y543 173 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 MTCL1Q9Y4B5 1905 aaKnown RBP13.35□□□□□ -0.27
CHFR-208ENST00000511001 PLXNA3P51805 1871 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 CARNS1A5YM72 827 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 GPR37L1O60883 481 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 POMCP01189 267 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 CTSAP10619 480 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 CDC25AP30304 524 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 SSTR3P32745 418 aaPredicted RBP13.34□□□□□ -0.27
CHFR-208ENST00000511001 RNASELQ05823 741 aaKnown RBP13.34□□□□□ -0.27
CHFR-208ENST00000511001 SMC1AQ14683 1233 aaKnown RBP13.34□□□□□ -0.27
CHFR-208ENST00000511001 FAM187BQ17R55 369 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 MCTP1Q6DN14 999 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 SYCE2Q6PIF2 218 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 DDX53Q86TM3 631 aaKnown RBP13.34□□□□□ -0.27
CHFR-208ENST00000511001 VPS52Q8N1B4 723 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 SNX29Q8TEQ0 813 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 AUTS2Q8WXX7 1259 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 SUSD6Q92537 303 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 GAD1Q99259 594 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 TMEM175Q9BSA9 504 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 CCDC113Q9H0I3 377 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 BHMT2Q9H2M3 363 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 NXF3Q9H4D5 531 aaKnown RBP13.34□□□□□ -0.27
CHFR-208ENST00000511001 DDX19AQ9NUU7 478 aaKnown RBP13.34□□□□□ -0.27
CHFR-208ENST00000511001 PRMT7Q9NVM4 692 aaPredicted RBP13.34□□□□□ -0.27
CHFR-208ENST00000511001 KANSL3Q9P2N6 904 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 KIAA1024Q9UPX6 916 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 CITO14578 2027 aa13.34□□□□□ -0.27
CHFR-208ENST00000511001 C2orf16Q68DN1 1984 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 A0A1B0GUA9 196 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 FSD2A1L4K1 749 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 E9PMD0 336 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 LAD1O00515 517 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 CLASP2O75122 1294 aaKnown RBP13.33□□□□□ -0.28
CHFR-208ENST00000511001 NPTXRO95502 500 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 CXCL14O95715 111 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 MLH1P40692 756 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 ATP2C1P98194 919 aaPredicted RBP13.33□□□□□ -0.28
CHFR-208ENST00000511001 DSC1Q08554 894 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 NCBP1Q09161 790 aaKnown RBP13.33□□□□□ -0.28
CHFR-208ENST00000511001 CUL4AQ13619 759 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 RILPL1Q5EBL4 403 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 ANKRD54Q6NXT1 300 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 SLC27A1Q6PCB7 646 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 KCNK18Q7Z418 384 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 ZBTB8OSQ8IWT0 167 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 COLGALT2Q8IYK4 626 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 GSTCDQ8NEC7 633 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 PRIMPOLQ96LW4 560 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 ZFP42Q96MM3 310 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 S1PR5Q9H228 398 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 UBN1Q9NPG3 1134 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 MARCH5Q9NX47 278 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 SMC3Q9UQE7 1217 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 GIT1Q9Y2X7 761 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 USP15Q9Y4E8 981 aaPredicted RBP13.33□□□□□ -0.28
CHFR-208ENST00000511001 HCFC2Q9Y5Z7 792 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 IRAK3Q9Y616 596 aa13.33□□□□□ -0.28
CHFR-208ENST00000511001 DENND4AQ7Z401 1863 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 ARL5CA6NH57 179 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 NRP1O14786 923 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 EFEMP2O95967 443 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 NAMPTP43490 491 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 SCNN1GP51170 649 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 LLGL2Q6P1M3 1020 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 ALYREFQ86V81 257 aaKnown RBP13.32□□□□□ -0.28
CHFR-208ENST00000511001 FAM193BQ96PV7 902 aaPredicted RBP13.32□□□□□ -0.28
CHFR-208ENST00000511001 KIFC3Q9BVG8 833 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 APOL6Q9BWW8 343 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 RAB34Q9BZG1 259 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 C2orf40Q9H1Z8 148 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 PDZD7Q9H5P4 517 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 USP20Q9Y2K6 914 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 FAN1Q9Y2M0 1017 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 STK24Q9Y6E0 443 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 VWA8A3KMH1 1905 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 ZMYM2Q9UBW7 1377 aa13.32□□□□□ -0.28
CHFR-208ENST00000511001 PDCD11Q14690 1871 aaKnown RBP13.31□□□□□ -0.28
CHFR-208ENST00000511001 TECTAO75443 2155 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 H3BQV1 296 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 LILRB3O75022 631 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 ALDH2P05091 517 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 PRKCBP05771 671 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 AKAP5P24588 427 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 MAPK7Q13164 816 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 PTPN14Q15678 1187 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 HYIQ5T013 277 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms