RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 TMEM67Q5HYA8 995 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 C4orf50Q6ZRC1 276 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 SPATC1Q76KD6 591 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 ARMC9Q7Z3E5 817 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 CCDC91Q7Z6B0 441 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 GOLGA6L1Q8N7Z2 621 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 GBP7Q8N8V2 638 aaPredicted RBP10.5□□□□□ -0.73
USP53-207ENST00000510852 CCDC26Q8TAB7 109 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 IGDCC4Q8TDY8 1250 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 UBAC1Q9BSL1 405 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 RABEP2Q9H5N1 569 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 STK39Q9UEW8 545 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 TRHDEQ9UKU6 1024 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 LIMCH1Q9UPQ0 1083 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 WDR90Q96KV7 1748 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 SEPT6Q14141 434 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 NEDD9Q14511 834 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 SSPNQ14714 243 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 COG2Q14746 738 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 SART3Q15020 963 aaKnown RBP10.5□□□□□ -0.73
USP53-207ENST00000510852 INTS8Q75QN2 995 aaKnown RBP10.5□□□□□ -0.73
USP53-207ENST00000510852 MIGA2Q7L4E1 593 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 FAM76AQ8TAV0 307 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 RIN3Q8TB24 985 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 ADAMTS18Q8TE60 1221 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 DCPSQ96C86 337 aaKnown RBP10.5□□□□□ -0.73
USP53-207ENST00000510852 PPP1R9BQ96SB3 815 aa10.5□□□□□ -0.73
USP53-207ENST00000510852 ZSCAN10Q96SZ4 725 aaPredicted RBP10.5□□□□□ -0.73
USP53-207ENST00000510852 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.5□□□□□ -0.73
USP53-207ENST00000510852 ANGEL1Q9UNK9 670 aaKnown RBP10.5□□□□□ -0.73
USP53-207ENST00000510852 RRN3P2A6NIE6 340 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 H0Y626 953 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 H3BRJ5 948 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 ZBED4O75132 1171 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 RTN2O75298 545 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 HSD3B1P14060 373 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 ADCY1Q08828 1119 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 SGCGQ13326 291 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 CLUL1Q15846 466 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 CLPPQ16740 277 aaPredicted RBP10.49□□□□□ -0.73
USP53-207ENST00000510852 DDR2Q16832 855 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 BOLA3Q53S33 107 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 PRAMEF18Q5VWM3 479 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 HEATR6Q6AI08 1181 aaKnown RBP10.49□□□□□ -0.73
USP53-207ENST00000510852 EPM2AIP1Q7L775 607 aaPredicted RBP10.49□□□□□ -0.73
USP53-207ENST00000510852 AADATQ8N5Z0 425 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 TMX3Q96JJ7 454 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 PI4K2AQ9BTU6 479 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 OSBPL10Q9BXB5 764 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 BRD9Q9H8M2 597 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 RRAGCQ9HB90 399 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 LY9Q9HBG7 655 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 ABCB6Q9NP58 842 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 IFT80Q9P2H3 777 aaPredicted RBP10.49□□□□□ -0.73
USP53-207ENST00000510852 JRKLQ9Y4A0 524 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 SIPA1L1O43166 1804 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 ERICH2A1L162 156 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 FRS3O43559 492 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 FGFR4P22455 802 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 S100A5P33763 92 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 NRLP54845 237 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 MAP3K10Q02779 954 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 IQCB1Q15051 598 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 SEC23AQ15436 765 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 CERKLQ49MI3 558 aaPredicted RBP10.49□□□□□ -0.73
USP53-207ENST00000510852 SMUG1Q53HV7 270 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 NBPF12Q5TAG4 269 aaPredicted RBP10.49□□□□□ -0.73
USP53-207ENST00000510852 CCDC149Q6ZUS6 474 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 GALNTL5Q7Z4T8 443 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 SULF1Q8IWU6 871 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 OR52K2Q8NGK3 314 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 NEDD1Q8NHV4 660 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 IL17RBQ9NRM6 502 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 HPF1Q9NWY4 346 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 GJD2Q9UKL4 321 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 MTUS1Q9ULD2 1270 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 STRIP2Q9ULQ0 834 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 GPR34Q9UPC5 381 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 PCDHGB5Q9Y5G0 923 aa10.49□□□□□ -0.73
USP53-207ENST00000510852 FSD2A1L4K1 749 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 LARGE1O95461 756 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 VEGFAP15692 232 aaPredicted RBP10.48□□□□□ -0.73
USP53-207ENST00000510852 TPP2P29144 1249 aaPredicted RBP10.48□□□□□ -0.73
USP53-207ENST00000510852 LIFRP42702 1097 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 ASMTP46597 345 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 NPTX2P47972 431 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 ATP5OP48047 213 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 CD83Q01151 205 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 KLHL30Q0D2K2 578 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 PPP2R5EQ16537 467 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 ME3Q16798 604 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 ALKBH5Q6P6C2 394 aaKnown RBP10.48□□□□□ -0.73
USP53-207ENST00000510852 TRIML2Q8N7C3 387 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 ATP11CQ8NB49 1132 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 GALNT6Q8NCL4 622 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 LRRC45Q96CN5 670 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 CCDC17Q96LX7 622 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 HERC2P3Q9BVR0 1158 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 RSAD1Q9HA92 442 aa10.48□□□□□ -0.73
USP53-207ENST00000510852 GRPEL1Q9HAV7 217 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms