RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 E2F7Q96AV8 911 aa9.52□□□□□ -0.89
USP53-206ENST00000510737 KRTAP9-8Q9BYQ0 159 aa9.52□□□□□ -0.89
USP53-206ENST00000510737 IL23AQ9NPF7 189 aa9.52□□□□□ -0.89
USP53-206ENST00000510737 KCMF1Q9P0J7 381 aa9.52□□□□□ -0.89
USP53-206ENST00000510737 DNAI1Q9UI46 699 aa9.52□□□□□ -0.89
USP53-206ENST00000510737 TOX4O94842 621 aa9.51□□□□□ -0.89
USP53-206ENST00000510737 HNRNPLP14866 589 aaKnown RBP eCLIP9.51□□□□□ -0.895e-7■■■■■ 30
USP53-206ENST00000510737 IGFALSP35858 605 aa9.51□□□□□ -0.89
USP53-206ENST00000510737 RABGGTBP53611 331 aa9.51□□□□□ -0.89
USP53-206ENST00000510737 IDI1Q13907 227 aa9.51□□□□□ -0.89
USP53-206ENST00000510737 ELAVL1Q15717 326 aaKnown RBP9.51□□□□□ -0.89
USP53-206ENST00000510737 TTC38Q5R3I4 469 aa9.51□□□□□ -0.89
USP53-206ENST00000510737 C1QL3Q5VWW1 255 aa9.51□□□□□ -0.89
USP53-206ENST00000510737 ESRP1Q6NXG1 681 aaKnown RBP9.51□□□□□ -0.89
USP53-206ENST00000510737 DEFB132Q7Z7B7 95 aa9.51□□□□□ -0.89
USP53-206ENST00000510737 KIAA1958Q8N8K9 716 aa9.51□□□□□ -0.89
USP53-206ENST00000510737 PLA2G15Q8NCC3 412 aa9.51□□□□□ -0.89
USP53-206ENST00000510737 DYDC2Q96IM9 177 aa9.51□□□□□ -0.89
USP53-206ENST00000510737 KANSL2Q9H9L4 492 aa9.51□□□□□ -0.89
USP53-206ENST00000510737 ACSS2Q9NR19 701 aa9.51□□□□□ -0.89
USP53-206ENST00000510737 KLRG2A4D1S0 409 aaPredicted RBP9.5□□□□□ -0.89
USP53-206ENST00000510737 ATF3P18847 181 aa9.5□□□□□ -0.89
USP53-206ENST00000510737 TGM1P22735 817 aa9.5□□□□□ -0.89
USP53-206ENST00000510737 SQSTM1Q13501 440 aa9.5□□□□□ -0.89
USP53-206ENST00000510737 PRAMEF9Q5VWM5 478 aa9.5□□□□□ -0.89
USP53-206ENST00000510737 LRRC59Q96AG4 307 aaKnown RBP9.5□□□□□ -0.89
USP53-206ENST00000510737 BCL9LQ86UU0 1499 aa9.5□□□□□ -0.89
USP53-206ENST00000510737 SETD5Q9C0A6 1442 aa9.49□□□□□ -0.89
USP53-206ENST00000510737 RPS6KA4O75676 772 aa9.49□□□□□ -0.89
USP53-206ENST00000510737 PEX11BO96011 259 aa9.49□□□□□ -0.89
USP53-206ENST00000510737 YY1P25490 414 aa9.49□□□□□ -0.89
USP53-206ENST00000510737 MAN2A2P49641 1150 aa9.49□□□□□ -0.89
USP53-206ENST00000510737 MRGPRGQ86SM5 289 aa9.49□□□□□ -0.89
USP53-206ENST00000510737 ULK2Q8IYT8 1036 aa9.49□□□□□ -0.89
USP53-206ENST00000510737 DDX17Q92841 729 aaKnown RBP9.49□□□□□ -0.89
USP53-206ENST00000510737 WDR92Q96MX6 357 aa9.49□□□□□ -0.89
USP53-206ENST00000510737 TUBGCP5Q96RT8 1024 aa9.49□□□□□ -0.89
USP53-206ENST00000510737 POLR3BQ9NW08 1133 aaPredicted RBP9.49□□□□□ -0.89
USP53-206ENST00000510737 TRPC5Q9UL62 973 aaPredicted RBP9.49□□□□□ -0.89
USP53-206ENST00000510737 DMRT1Q9Y5R6 373 aa9.49□□□□□ -0.89
USP53-206ENST00000510737 XDHP47989 1333 aa9.49□□□□□ -0.89
USP53-206ENST00000510737 NCOA3Q9Y6Q9 1424 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 GOLGA8BA8MQT2 603 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 ASLP04424 464 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 VSIG10L2P0DP72 767 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 SLC9A1P19634 815 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 SDSP20132 328 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 COL10A1Q03692 680 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 CNGB1Q14028 1251 aaPredicted RBP9.48□□□□□ -0.89
USP53-206ENST00000510737 EPHA7Q15375 998 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 GAGE13Q4V321 117 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 FNDC3BQ53EP0 1204 aaKnown RBP9.48□□□□□ -0.89
USP53-206ENST00000510737 UNQ6494/PRO21346Q6UXR6 183 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 BMP8AQ7Z5Y6 402 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 ELOA2Q8IYF1 753 aaPredicted RBP9.48□□□□□ -0.89
USP53-206ENST00000510737 RPUSD2Q8IZ73 545 aaKnown RBP9.48□□□□□ -0.89
USP53-206ENST00000510737 ELF4Q99607 663 aaPredicted RBP9.48□□□□□ -0.89
USP53-206ENST00000510737 TCF25Q9BQ70 676 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 GPR87Q9BY21 358 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 PCIF1Q9H4Z3 704 aa9.48□□□□□ -0.89
USP53-206ENST00000510737 PIK3C2BO00750 1634 aa9.47□□□□□ -0.89
USP53-206ENST00000510737 MROH1Q8NDA8 1641 aa9.47□□□□□ -0.89
USP53-206ENST00000510737 B4E1Z4 1266 aa9.47□□□□□ -0.89
USP53-206ENST00000510737 FAM20BO75063 409 aa9.47□□□□□ -0.89
USP53-206ENST00000510737 TSPY4P0CV99 314 aa9.47□□□□□ -0.89
USP53-206ENST00000510737 TSPY10P0CW01 314 aa9.47□□□□□ -0.89
USP53-206ENST00000510737 NANOS3P60323 173 aaKnown RBP9.47□□□□□ -0.89
USP53-206ENST00000510737 FKBP15Q5T1M5 1219 aa9.47□□□□□ -0.89
USP53-206ENST00000510737 PIK3R6Q5UE93 754 aa9.47□□□□□ -0.89
USP53-206ENST00000510737 KANSL1Q7Z3B3 1105 aa9.47□□□□□ -0.89
USP53-206ENST00000510737 B4GALT6Q9UBX8 382 aa9.47□□□□□ -0.89
USP53-206ENST00000510737 A0A0A6YYK5 440 aaPredicted RBP9.46□□□□□ -0.9
USP53-206ENST00000510737 H7C1D1 291 aa9.46□□□□□ -0.9
USP53-206ENST00000510737 CBX4O00257 560 aa9.46□□□□□ -0.9
USP53-206ENST00000510737 OPA1O60313 960 aa9.46□□□□□ -0.9
USP53-206ENST00000510737 STC2O76061 302 aa9.46□□□□□ -0.9
USP53-206ENST00000510737 CYP17A1P05093 508 aa9.46□□□□□ -0.9
USP53-206ENST00000510737 KRTAP1-1Q07627 177 aa9.46□□□□□ -0.9
USP53-206ENST00000510737 HTR3DQ70Z44 454 aa9.46□□□□□ -0.9
USP53-206ENST00000510737 PGBD4Q96DM1 585 aa9.46□□□□□ -0.9
USP53-206ENST00000510737 SOX7Q9BT81 388 aa9.46□□□□□ -0.9
USP53-206ENST00000510737 PITHD1Q9GZP4 211 aaPredicted RBP9.46□□□□□ -0.9
USP53-206ENST00000510737 CFAP65Q6ZU64 1925 aaKnown RBP9.46□□□□□ -0.9
USP53-206ENST00000510737 PNPLA6Q8IY17 1366 aa9.46□□□□□ -0.9
USP53-206ENST00000510737 CCDC141Q6ZP82 1450 aa9.46□□□□□ -0.9
USP53-206ENST00000510737 GRXCR1A8MXD5 290 aa9.45□□□□□ -0.9
USP53-206ENST00000510737 PPP1R12AO14974 1030 aaPredicted RBP9.45□□□□□ -0.9
USP53-206ENST00000510737 ZNF575Q86XF7 245 aa9.45□□□□□ -0.9
USP53-206ENST00000510737 GSPT2Q8IYD1 628 aaKnown RBP9.45□□□□□ -0.9
USP53-206ENST00000510737 DNAJC2Q99543 621 aaKnown RBP9.45□□□□□ -0.9
USP53-206ENST00000510737 OSBPL2Q9H1P3 480 aa9.45□□□□□ -0.9
USP53-206ENST00000510737 TRPS1Q9UHF7 1281 aa9.45□□□□□ -0.9
USP53-206ENST00000510737 TBX22Q9Y458 520 aa9.45□□□□□ -0.9
USP53-206ENST00000510737 ARHGAP31Q2M1Z3 1444 aa9.45□□□□□ -0.9
USP53-206ENST00000510737 SOGA3Q5TF21 947 aa9.44□□□□□ -0.9
USP53-206ENST00000510737 MRGPREQ86SM8 312 aa9.44□□□□□ -0.9
USP53-206ENST00000510737 ZNF512Q96ME7 567 aaPredicted RBP9.44□□□□□ -0.9
USP53-206ENST00000510737 TTPALQ9BTX7 342 aa9.44□□□□□ -0.9
USP53-206ENST00000510737 H2AFY2Q9P0M6 372 aaPredicted RBP9.44□□□□□ -0.9
USP53-206ENST00000510737 BLMP54132 1417 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms