RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 KIF3AQ9Y496 699 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 IPPQ9Y573 584 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 BDP1A6H8Y1 2624 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 ARHGEF35A5YM69 484 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 LRRIQ4A6NIV6 560 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 C19orf67A6NJJ6 358 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 PP2D1A8MPX8 630 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 INPPL1O15357 1258 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 DDHD2O94830 711 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 GALTP07902 379 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 SSTR3P32745 418 aaPredicted RBP11.4□□□□□ -0.58
PFDN1-203ENST00000510217 CCT6AP40227 531 aaKnown RBP11.4□□□□□ -0.58
PFDN1-203ENST00000510217 MLH1P40692 756 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 SLC11A1P49279 550 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 ALDH7A1P49419 539 aaKnown RBP11.4□□□□□ -0.58
PFDN1-203ENST00000510217 KRT17Q04695 432 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 RNASELQ05823 741 aaKnown RBP11.4□□□□□ -0.58
PFDN1-203ENST00000510217 SMC1AQ14683 1233 aaKnown RBP11.4□□□□□ -0.58
PFDN1-203ENST00000510217 IL17AQ16552 155 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 PADI6Q6TGC4 694 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 URGCPQ8TCY9 931 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 SNX29Q8TEQ0 813 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 TMEM169Q96HH4 297 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 IGSF21Q96ID5 467 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 VN1R3Q9BXE9 311 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 GBP3Q9H0R5 595 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 ZBP1Q9H171 429 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 NXF3Q9H4D5 531 aaKnown RBP11.4□□□□□ -0.58
PFDN1-203ENST00000510217 EPHX3Q9H6B9 360 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 NGRNQ9NPE2 291 aaKnown RBP11.4□□□□□ -0.58
PFDN1-203ENST00000510217 LRWD1Q9UFC0 647 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 HES2Q9Y543 173 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 NCOR1O75376 2440 aa11.4□□□□□ -0.58
PFDN1-203ENST00000510217 CARNS1A5YM72 827 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 C2orf71A6NGG8 1288 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 LAD1O00515 517 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 EDN1P05305 212 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 ITGA4P13612 1032 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 CYP11B2P19099 503 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 PRPHP41219 470 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 MRE11P49959 708 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 ATP2C1P98194 919 aaPredicted RBP11.39□□□□□ -0.59
PFDN1-203ENST00000510217 MCTP1Q6DN14 999 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 TMEM184AQ6ZMB5 413 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 TMC7Q7Z402 723 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 CDR2LQ86X02 465 aaPredicted RBP11.39□□□□□ -0.59
PFDN1-203ENST00000510217 CNNM3Q8NE01 707 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 MMTAG2Q9BU76 263 aaKnown RBP11.39□□□□□ -0.59
PFDN1-203ENST00000510217 CCDC113Q9H0I3 377 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 BHMT2Q9H2M3 363 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 C11orf16Q9NQ32 467 aa11.39□□□□□ -0.59
PFDN1-203ENST00000510217 DDX19AQ9NUU7 478 aaKnown RBP11.39□□□□□ -0.59
PFDN1-203ENST00000510217 USP15Q9Y4E8 981 aaPredicted RBP11.39□□□□□ -0.59
PFDN1-203ENST00000510217 A0A1B0GUA9 196 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 ARL5CA6NH57 179 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 TTLL13PA6NNM8 815 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 PI4K2BG5E9Z4 385 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 NPTXRO95502 500 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 POMCP01189 267 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 NAMPTP43490 491 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 DSC1Q08554 894 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 PDIA5Q14554 519 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 FAM187BQ17R55 369 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 RILPL1Q5EBL4 403 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 LLGL2Q6P1M3 1020 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 SLC27A1Q6PCB7 646 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 DDX53Q86TM3 631 aaKnown RBP11.38□□□□□ -0.59
PFDN1-203ENST00000510217 ZBTB8OSQ8IWT0 167 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 VPS52Q8N1B4 723 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 MRPL43Q8N983 215 aaKnown RBP11.38□□□□□ -0.59
PFDN1-203ENST00000510217 AUTS2Q8WXX7 1259 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 SUSD6Q92537 303 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 PRIMPOLQ96LW4 560 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 ZFP42Q96MM3 310 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 GAD1Q99259 594 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 TMEM175Q9BSA9 504 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 KIFC3Q9BVG8 833 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 APOL6Q9BWW8 343 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 C1QTNF1Q9BXJ1 281 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 RAB34Q9BZG1 259 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 FZD8Q9H461 694 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 UBN1Q9NPG3 1134 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 PRMT7Q9NVM4 692 aaPredicted RBP11.38□□□□□ -0.59
PFDN1-203ENST00000510217 MARCH5Q9NX47 278 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 KIAA1024Q9UPX6 916 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 SMC3Q9UQE7 1217 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 ZMYM2Q9UBW7 1377 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 DENND4AQ7Z401 1863 aa11.38□□□□□ -0.59
PFDN1-203ENST00000510217 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-203ENST00000510217 E9PMD0 336 aa11.37□□□□□ -0.59
PFDN1-203ENST00000510217 H3BQV1 296 aa11.37□□□□□ -0.59
PFDN1-203ENST00000510217 CLASP2O75122 1294 aaKnown RBP11.37□□□□□ -0.59
PFDN1-203ENST00000510217 SRGAP2BP0DMP2 458 aa11.37□□□□□ -0.59
PFDN1-203ENST00000510217 CTSAP10619 480 aa11.37□□□□□ -0.59
PFDN1-203ENST00000510217 CDC25AP30304 524 aa11.37□□□□□ -0.59
PFDN1-203ENST00000510217 CA8P35219 290 aa11.37□□□□□ -0.59
PFDN1-203ENST00000510217 SCNN1GP51170 649 aa11.37□□□□□ -0.59
PFDN1-203ENST00000510217 NCBP1Q09161 790 aaKnown RBP11.37□□□□□ -0.59
PFDN1-203ENST00000510217 CUL4AQ13619 759 aa11.37□□□□□ -0.59
PFDN1-203ENST00000510217 KLHL40Q2TBA0 621 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms