RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	ANKEF1	Q9NU02	776 aa		11.45	□□□□□ -0.58
PTPN20-222	ENST00000509774	SETD4	Q9NVD3	440 aa		11.45	□□□□□ -0.58
PTPN20-222	ENST00000509774	PLAGL2	Q9UPG8	496 aa		11.45	□□□□□ -0.58
PTPN20-222	ENST00000509774	SRPRB	Q9Y5M8	271 aa	Known RBP	11.45	□□□□□ -0.58
PTPN20-222	ENST00000509774	CACNA1I	Q9P0X4	2223 aa		11.45	□□□□□ -0.58
PTPN20-222	ENST00000509774	PI15	O43692	258 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	ZNF862	O60290	1169 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	PPP6R2	O75170	966 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	MARK3	P27448	753 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	ATXN1	P54253	815 aa	Known RBP	11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	ZNF200	P98182	395 aa	Predicted RBP	11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	PRKCE	Q02156	737 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	PTPA	Q15257	358 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	KRT79	Q5XKE5	535 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	RBM23	Q86U06	439 aa	Known RBP	11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	RSPH3	Q86UC2	560 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	TPH2	Q8IWU9	490 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	LINC00301	Q8NCQ3	95 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	VN1R2	Q8NFZ6	395 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	PPP2R3C	Q969Q6	453 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	DYDC2	Q96IM9	177 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	NACC1	Q96RE7	527 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	HINFP	Q9BQA5	517 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	LXN	Q9BS40	222 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	RC3H2	Q9HBD1	1191 aa	Known RBP	11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	RWDD3	Q9Y3V2	267 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	PCDHA2	Q9Y5H9	948 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	CLIC4	Q9Y696	253 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774		R4GN57	208 aa		11.44	□□□□□ -0.58
PTPN20-222	ENST00000509774	ADGRA3	Q8IWK6	1321 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	SMIM35	A0A1B0GVV1	85 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	DDX11L8	A8MPP1	907 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	ACTN4	O43707	911 aa	Known RBP	11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	GAS2	O43903	313 aa	Known RBP	11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	STBD1	O95210	358 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	SPATA31C1	P0DKV0	1188 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	TMOD1	P28289	359 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	PKP1	Q13835	747 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	HIC1	Q14526	733 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	TARBP2	Q15633	366 aa	Known RBP	11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	HYI	Q5T013	277 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	MARCH8	Q5T0T0	291 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	KIAA0319	Q5VV43	1072 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	CATSPER3	Q86XQ3	398 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	DTWD2	Q8NBA8	298 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	LMBR1	Q8WVP7	490 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	RUBCN	Q92622	972 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	CHAMP1	Q96JM3	812 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	USP28	Q96RU2	1077 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	NT5C3A	Q9H0P0	336 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	MFSD1	Q9H3U5	465 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	RGL1	Q9NZL6	768 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	TUBE1	Q9UJT0	475 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	DBR1	Q9UK59	544 aa	Known RBP	11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	RCOR1	Q9UKL0	485 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	ZDHHC9	Q9Y397	364 aa		11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	RBM19	Q9Y4C8	960 aa	Known RBP	11.43	□□□□□ -0.58
PTPN20-222	ENST00000509774	KDM3A	Q9Y4C1	1321 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	VWA3A	A6NCI4	1184 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	RSPH10B2	B2RC85	870 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	ZBTB42	B2RXF5	422 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	SPTLC2	O15270	562 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	TREH	O43280	583 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	ITGB1	P05556	798 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	ADRB1	P08588	477 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	RSPH10B	P0C881	870 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	AOC1	P19801	751 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	KLRC1	P26715	233 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	YWHAB	P31946	246 aa	Known RBP	11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	UBA7	P41226	1012 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	DNM2	P50570	870 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	KRT85	P78386	507 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	STK38	Q15208	465 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	IL17A	Q16552	155 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	UGCG	Q16739	394 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	FAM173B	Q6P4H8	233 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	MTHFD1L	Q6UB35	978 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	ANO5	Q75V66	913 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	KRI1	Q8N9T8	703 aa	Known RBP	11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	SPPL3	Q8TCT6	385 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	SEPT8	Q92599	483 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	PLVAP	Q9BX97	442 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	CCSER1	Q9C0I3	900 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	S1PR5	Q9H228	398 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	CYP26B1	Q9NR63	512 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	TFIP11	Q9UBB9	837 aa	Known RBP	11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	SQOR	Q9Y6N5	450 aa		11.42	□□□□□ -0.58
PTPN20-222	ENST00000509774	IGKV6-21	A0A0C4DH24	114 aa		11.41	□□□□□ -0.58
PTPN20-222	ENST00000509774	MAF	O75444	373 aa	Predicted RBP	11.41	□□□□□ -0.58
PTPN20-222	ENST00000509774	NPR3	P17342	541 aa		11.41	□□□□□ -0.58
PTPN20-222	ENST00000509774	CCT6A	P40227	531 aa	Known RBP	11.41	□□□□□ -0.58
PTPN20-222	ENST00000509774	RFC5	P40937	340 aa		11.41	□□□□□ -0.58
PTPN20-222	ENST00000509774	SLC19A1	P41440	591 aa		11.41	□□□□□ -0.58
PTPN20-222	ENST00000509774	CYP4A11	Q02928	519 aa		11.41	□□□□□ -0.58
PTPN20-222	ENST00000509774	TBC1D8B	Q0IIM8	1120 aa		11.41	□□□□□ -0.58
PTPN20-222	ENST00000509774	CTTN	Q14247	550 aa	Known RBP	11.41	□□□□□ -0.58
PTPN20-222	ENST00000509774	FAM26D	Q5JW98	314 aa		11.41	□□□□□ -0.58
PTPN20-222	ENST00000509774	IER5	Q5VY09	327 aa		11.41	□□□□□ -0.58
PTPN20-222	ENST00000509774	FLCN	Q8NFG4	579 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms