RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SFNP31947 248 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 PGM5Q15124 567 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 ODF2Q5BJF6 829 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 DUPD1Q68J44 220 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 TRMT1LQ7Z2T5 733 aaKnown RBP19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 FAM71AQ8IYT1 594 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 PPM1KQ8N3J5 372 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 PLEKHO2Q8TD55 490 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 GPRC5CQ9NQ84 441 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 ANKEF1Q9NU02 776 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 PGAP2Q9UHJ9 254 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 ZNRF3Q9ULT6 936 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 GOLGA8IPA6NC78 632 aa19.33■□□□□ 0.68
CCHCR1-228ENST00000509552 GOLGA8JA6NMD2 632 aa19.33■□□□□ 0.68
CCHCR1-228ENST00000509552 TMEM110-MUSTN1A8MSY1 372 aa19.33■□□□□ 0.68
CCHCR1-228ENST00000509552 RPS6P62753 249 aaKnown RBP19.33■□□□□ 0.68
CCHCR1-228ENST00000509552 SPP2Q13103 211 aa19.33■□□□□ 0.68
CCHCR1-228ENST00000509552 UGCGQ16739 394 aa19.33■□□□□ 0.68
CCHCR1-228ENST00000509552 ZNF746Q6NUN9 644 aaPredicted RBP19.33■□□□□ 0.68
CCHCR1-228ENST00000509552 NIM1KQ8IY84 436 aa19.33■□□□□ 0.68
CCHCR1-228ENST00000509552 ZSWIM2Q8NEG5 633 aa19.33■□□□□ 0.68
CCHCR1-228ENST00000509552 EPS8L1Q8TE68 723 aa19.33■□□□□ 0.68
CCHCR1-228ENST00000509552 ZSWIM1Q9BR11 485 aa19.33■□□□□ 0.68
CCHCR1-228ENST00000509552 ERVK-5Q9HDB9 667 aa19.33■□□□□ 0.68
CCHCR1-228ENST00000509552 TMEM51Q9NW97 253 aa19.33■□□□□ 0.68
CCHCR1-228ENST00000509552 TMEM150BA6NC51 233 aa19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 CCDC169A6NNP5 214 aa19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 EIF3BP55884 814 aaKnown RBP19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 KRT76Q01546 638 aa19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 MAP2K1Q02750 393 aaPredicted RBP19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 IFFO1Q0D2I5 559 aa19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 RASA3Q14644 834 aa19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 MESDQ14696 234 aa19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 SNRNP35Q16560 246 aaKnown RBP19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 SEL1L2Q5TEA6 688 aa19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 ZNF772Q68DY9 489 aaPredicted RBP19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 ATP8B4Q8TF62 1192 aa19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 KAT5Q92993 513 aa19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 KIAA1683Q9H0B3 1180 aa19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 VPS33BQ9H267 617 aa19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 STK32BQ9NY57 414 aa19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 PNMA2Q9UL42 364 aa19.32■□□□□ 0.68
CCHCR1-228ENST00000509552 WNT10BO00744 389 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 PHF2O75151 1096 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 PPFIA2O75334 1257 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 GGPS1O95749 300 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 ADRB2P07550 413 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 CHRNA3P32297 505 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 COPB2P35606 906 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 NBPF9Q3BBW0 867 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 KRT39Q6A163 491 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 MICALCLQ6ZW33 695 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 TADA2BQ86TJ2 420 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 NOP9Q86U38 636 aaKnown RBP19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 JAMLQ86YT9 394 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 HVCN1Q96D96 273 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 RMDN3Q96TC7 470 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 WNT8AQ9H1J5 351 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 NOCTQ9UK39 431 aaKnown RBP19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 TBX20Q9UMR3 447 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 ATP8A1Q9Y2Q0 1164 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 PHF20L1A8MW92 1017 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 CYP26A1O43174 497 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 MTA2O94776 668 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 DMP1Q13316 513 aaPredicted RBP19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 KRT71Q3SY84 523 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 CBWD2Q8IUF1 395 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 GLG1Q92896 1179 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 PCDHB18PQ96TA0 734 aa19.31■□□□□ 0.68
CCHCR1-228ENST00000509552 KIAA0754O94854 1291 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 CHRNB2P17787 502 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 COMTP21964 271 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 DRG2P55039 364 aaKnown RBP19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 KCTD19Q17RG1 926 aaPredicted RBP19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 TTC31Q49AM3 519 aaPredicted RBP19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 ARHGEF16Q5VV41 709 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 PLA2G4FQ68DD2 849 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 USP37Q86T82 979 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 NLRP14Q86W24 1093 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 MAP4K3Q8IVH8 894 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 KRT35Q92764 455 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 CCDC127Q96BQ5 260 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 KREMEN1Q96MU8 473 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.3■□□□□ 0.682e-7■■■■■ 163
CCHCR1-228ENST00000509552 TESPA1A2RU30 521 aaPredicted RBP19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 ZBED4O75132 1171 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 GBP1P32455 592 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 MCCD1P59942 119 aaPredicted RBP19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 TBC1D10BQ4KMP7 808 aaPredicted RBP19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 RNF207Q6ZRF8 634 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 TMEM161BQ8NDZ6 487 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 ZNF473Q8WTR7 871 aaKnown RBP19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 SHC3Q92529 594 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 SAAL1Q96ER3 474 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 ZBED3Q96IU2 234 aaPredicted RBP19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 CCT8L2Q96SF2 557 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 PDCD2LQ9BRP1 358 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 TMEM8AQ9HCN3 771 aa19.3■□□□□ 0.68
CCHCR1-228ENST00000509552 NOVA2Q9UNW9 492 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms