RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 USO1O60763 962 aaKnown RBP17.09■□□□□ 0.33
TPM3-219ENST00000509409 XRCC6P12956 609 aaKnown RBP eCLIP17.09■□□□□ 0.339e-13■□□□□ 8.6
TPM3-219ENST00000509409 ARL2P36404 184 aa17.09■□□□□ 0.33
TPM3-219ENST00000509409 RARRES1P49788 294 aa17.09■□□□□ 0.33
TPM3-219ENST00000509409 GNL2Q13823 731 aaKnown RBP17.09■□□□□ 0.33
TPM3-219ENST00000509409 CAPSQ13938 189 aa17.09■□□□□ 0.33
TPM3-219ENST00000509409 ZNF174Q15697 407 aa17.09■□□□□ 0.33
TPM3-219ENST00000509409 KANK3Q6NY19 840 aa17.09■□□□□ 0.33
TPM3-219ENST00000509409 SUGP1Q8IWZ8 645 aaKnown RBP17.09■□□□□ 0.33
TPM3-219ENST00000509409 CCDC51Q96ER9 411 aa17.09■□□□□ 0.33
TPM3-219ENST00000509409 FBXL18Q96ME1 805 aa17.09■□□□□ 0.33
TPM3-219ENST00000509409 POLR3FQ9H1D9 316 aaPredicted RBP17.09■□□□□ 0.33
TPM3-219ENST00000509409 KCNH6Q9H252 994 aa17.09■□□□□ 0.33
TPM3-219ENST00000509409 TMEM60Q9H2L4 133 aa17.09■□□□□ 0.33
TPM3-219ENST00000509409 POMKQ9H5K3 350 aa17.09■□□□□ 0.33
TPM3-219ENST00000509409 PRG3Q9Y2Y8 225 aaPredicted RBP17.09■□□□□ 0.33
TPM3-219ENST00000509409 HES2Q9Y543 173 aa17.09■□□□□ 0.33
TPM3-219ENST00000509409 IRAK3Q9Y616 596 aa17.09■□□□□ 0.33
TPM3-219ENST00000509409 POTEMA6NI47 508 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 C2CD2LO14523 706 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 B4GALT3O60512 393 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 NR1I2O75469 434 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 GLRA2P23416 452 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 MBTD1Q05BQ5 628 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 SIGLEC14Q08ET2 396 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 PTPN14Q15678 1187 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 PTPN21Q16825 1174 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 BMP8AQ7Z5Y6 402 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 SLC22A17Q8WUG5 538 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 KLHL5Q96PQ7 755 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 GAD1Q99259 594 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 VN1R3Q9BXE9 311 aa17.08■□□□□ 0.32
TPM3-219ENST00000509409 MRPL17Q9NRX2 175 aaKnown RBP17.08■□□□□ 0.32
TPM3-219ENST00000509409 DBR1Q9UK59 544 aaKnown RBP17.08■□□□□ 0.32
TPM3-219ENST00000509409 ARL5CA6NH57 179 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 LRRIQ4A6NIV6 560 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 ARF4P18085 180 aaPredicted RBP17.07■□□□□ 0.32
TPM3-219ENST00000509409 MLH1P40692 756 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 SCNN1GP51170 649 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 ST3GAL1Q11201 340 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 TMC5Q6UXY8 1006 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 ALYREFQ86V81 257 aaKnown RBP17.07■□□□□ 0.32
TPM3-219ENST00000509409 CATSPER3Q86XQ3 398 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 IFNLR1Q8IU57 520 aaPredicted RBP17.07■□□□□ 0.32
TPM3-219ENST00000509409 FAM184AQ8NB25 1140 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 ERMNQ8TAM6 284 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 NACC1Q96RE7 527 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 TUFT1Q9NNX1 390 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 MIOSQ9NXC5 875 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 PARP2Q9UGN5 583 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 GIT1Q9Y2X7 761 aa17.07■□□□□ 0.32
TPM3-219ENST00000509409 C2CD4DB7Z1M9 353 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 MED24O75448 989 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 NPTXRO95502 500 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 URODP06132 367 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 CNPP09543 421 aaKnown RBP17.06■□□□□ 0.32
TPM3-219ENST00000509409 SPATA31C1P0DKV0 1188 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 AKAP5P24588 427 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 TMEM132AQ24JP5 1023 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 TAS1R1Q7RTX1 841 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 CDR2LQ86X02 465 aaPredicted RBP17.06■□□□□ 0.32
TPM3-219ENST00000509409 COLGALT2Q8IYK4 626 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 KREMEN2Q8NCW0 462 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 MCPH1Q8NEM0 835 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 ZSCAN31Q96LW9 406 aaPredicted RBP17.06■□□□□ 0.32
TPM3-219ENST00000509409 LLPHQ9BRT6 129 aaKnown RBP17.06■□□□□ 0.32
TPM3-219ENST00000509409 COLEC11Q9BWP8 271 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 NFKBIZQ9BYH8 718 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 GPRC5CQ9NQ84 441 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 SSX2IPQ9Y2D8 614 aa17.06■□□□□ 0.32
TPM3-219ENST00000509409 B4GALT5O43286 388 aa17.05■□□□□ 0.32
TPM3-219ENST00000509409 SOD2P04179 222 aa17.05■□□□□ 0.32
TPM3-219ENST00000509409 AMHR2Q16671 573 aa17.05■□□□□ 0.32
TPM3-219ENST00000509409 KIAA1841Q6NSI8 718 aa17.05■□□□□ 0.32
TPM3-219ENST00000509409 SLC27A1Q6PCB7 646 aa17.05■□□□□ 0.32
TPM3-219ENST00000509409 ZBTB8OSQ8IWT0 167 aa17.05■□□□□ 0.32
TPM3-219ENST00000509409 FBXL6Q8N531 539 aa17.05■□□□□ 0.32
TPM3-219ENST00000509409 ZFP42Q96MM3 310 aa17.05■□□□□ 0.32
TPM3-219ENST00000509409 POLR3CQ9BUI4 534 aaPredicted RBP17.05■□□□□ 0.32
TPM3-219ENST00000509409 FOXP1Q9H334 677 aaPredicted RBP17.05■□□□□ 0.32
TPM3-219ENST00000509409 NXF3Q9H4D5 531 aaKnown RBP17.05■□□□□ 0.32
TPM3-219ENST00000509409 ARHGEF35A5YM69 484 aa17.04■□□□□ 0.32
TPM3-219ENST00000509409 OR52Z1P0C646 297 aa17.04■□□□□ 0.32
TPM3-219ENST00000509409 LIG1P18858 919 aa17.04■□□□□ 0.32
TPM3-219ENST00000509409 RBM25P49756 843 aaKnown RBP17.04■□□□□ 0.32
TPM3-219ENST00000509409 CLCN4P51793 760 aa17.04■□□□□ 0.32
TPM3-219ENST00000509409 HMGN5P82970 282 aaKnown RBP17.04■□□□□ 0.32
TPM3-219ENST00000509409 NHLH1Q02575 133 aa17.04■□□□□ 0.32
TPM3-219ENST00000509409 PLCD3Q8N3E9 789 aa17.04■□□□□ 0.32
TPM3-219ENST00000509409 TDRD5Q8NAT2 981 aaKnown RBP17.04■□□□□ 0.32
TPM3-219ENST00000509409 HERC2P3Q9BVR0 1158 aa17.04■□□□□ 0.32
TPM3-219ENST00000509409 SFXN1Q9H9B4 322 aa17.04■□□□□ 0.32
TPM3-219ENST00000509409 PRMT7Q9NVM4 692 aaPredicted RBP17.04■□□□□ 0.32
TPM3-219ENST00000509409 MARCH5Q9NX47 278 aa17.04■□□□□ 0.32
TPM3-219ENST00000509409 KLK14Q9P0G3 267 aa17.04■□□□□ 0.32
TPM3-219ENST00000509409 LIMD1Q9UGP4 676 aa17.04■□□□□ 0.32
TPM3-219ENST00000509409 A0A1B0GUA9 196 aa17.03■□□□□ 0.32
TPM3-219ENST00000509409 LILRB3O75022 631 aa17.03■□□□□ 0.32
TPM3-219ENST00000509409 MYBP10242 640 aa17.03■□□□□ 0.32
TPM3-219ENST00000509409 RPA1P27694 616 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms