RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 LIG1P18858 919 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 NCLP19338 710 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 DNAJB1P25685 340 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 IRS1P35568 1242 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 PPM1AP35813 382 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 PBX3P40426 434 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 ME1P48163 572 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 NRIP1P48552 1158 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 NDUFV1P49821 464 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 NDUFA8P51970 172 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 PTENP60484 403 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 UBE3AQ05086 875 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 HYAL1Q12794 435 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 BMS1Q14692 1282 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 CLUL1Q15846 466 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 AMHR2Q16671 573 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 PUS10Q3MIT2 529 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 LEXMQ3ZCV2 418 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 TPRNQ4KMQ1 711 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 PTCRAQ6ISU1 281 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 LRRC55Q6ZSA7 311 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 ZNF598Q86UK7 904 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 ZBTB8OSQ8IWT0 167 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 URGCPQ8TCY9 931 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 KCNG4Q8TDN1 519 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 DNAJC19Q96DA6 116 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 CWH43Q9H720 699 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 TLE6Q9H808 572 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 ENTPD7Q9NQZ7 604 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 TLR9Q9NR96 1032 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 RNF19AQ9NV58 838 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 SPG21Q9NZD8 308 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 FAM50BQ9Y247 325 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 TTC28Q96AY4 2481 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 COL4A4P53420 1690 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 NT5C1B-RDH14C9J2C7 533 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 TSPAN1O60635 241 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 ZNF623O75123 536 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 HIP1RO75146 1068 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 PRR29P0C7W0 189 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 ITGA4P13612 1032 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 ATF7P17544 494 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 AXLP30530 894 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 UBA7P41226 1012 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 SNW1Q13573 536 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 CAMK1Q14012 370 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 GIT2Q14161 759 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 DHX8Q14562 1220 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 PCBP1Q15365 356 aaKnown RBP eCLIP9.65□□□□□ -0.865e-8■■■■■ 41.6
PDLIM5-213ENST00000509357 NOMO2Q5JPE7 1267 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 PLPP4Q5VZY2 271 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 ADALQ6DHV7 355 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 NOTUMQ6P988 496 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 CLEC17AQ6ZS10 378 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 TMC7Q7Z402 723 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 HACE1Q8IYU2 909 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 CNNM3Q8NE01 707 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 GLIS3Q8NEA6 775 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 ENGASEQ8NFI3 743 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 RSPH1Q8WYR4 309 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 MRPS27Q92552 414 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 LARP4BQ92615 738 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 TMEM169Q96HH4 297 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 CPB2Q96IY4 423 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 CDK5RAP3Q96JB5 506 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 IFT74Q96LB3 600 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 REEP2Q9BRK0 252 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 TRAIPQ9BWF2 469 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 APOL6Q9BWW8 343 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 IKZF4Q9H2S9 585 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 SERTAD1Q9UHV2 236 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 CFAP45Q9UL16 551 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 DNM3Q9UQ16 869 aa9.65□□□□□ -0.86
PDLIM5-213ENST00000509357 TRIP11Q15643 1979 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 CNTNAP2Q9UHC6 1331 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 PER2O15055 1255 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 POLR2DO15514 142 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 OFD1O75665 1012 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 SSBP05455 408 aaKnown RBP eCLIP9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 SRGAP2BP0DMP2 458 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 CMA1P23946 247 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 GUCY2CP25092 1073 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 HOXA11P31270 313 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 SSTR3P32745 418 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 GTF2F1P35269 517 aaKnown RBP eCLIP9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 BCAR1P56945 870 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 ERVFC1P60507 584 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 PLCB3Q01970 1234 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 MBTD1Q05BQ5 628 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 POU5F1BQ06416 359 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 PPP2R5AQ15172 486 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 PDE12Q6L8Q7 609 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 ADGRD2Q7Z7M1 963 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 RASSF8Q8NHQ8 419 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 DEPTORQ8TB45 409 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 HPS3Q969F9 1004 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 DHX58Q96C10 678 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 CCDC51Q96ER9 411 aa9.64□□□□□ -0.87
PDLIM5-213ENST00000509357 TCF25Q9BQ70 676 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms