RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 CATSPER3Q86XQ3 398 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 ZNF280BQ86YH2 543 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 VPS52Q8N1B4 723 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 TDRD5Q8NAT2 981 aaKnown RBP12.14□□□□□ -0.47
RNF4-212ENST00000509258 SMG8Q8ND04 991 aaKnown RBP12.14□□□□□ -0.47
RNF4-212ENST00000509258 AUTS2Q8WXX7 1259 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 BSNDQ8WZ55 320 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 PGBD4Q96DM1 585 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 MTRQ99707 1265 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 LLPHQ9BRT6 129 aaKnown RBP12.14□□□□□ -0.47
RNF4-212ENST00000509258 ZBP1Q9H171 429 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 RNF39Q9H2S5 420 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 POLD4Q9HCU8 107 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 IRAK3Q9Y616 596 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 PDCD11Q14690 1871 aaKnown RBP12.13□□□□□ -0.47
RNF4-212ENST00000509258 C2CD4DB7Z1M9 353 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 B4GALT5O43286 388 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 GAS2O43903 313 aaKnown RBP12.13□□□□□ -0.47
RNF4-212ENST00000509258 ST18O60284 1047 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 USO1O60763 962 aaKnown RBP12.13□□□□□ -0.47
RNF4-212ENST00000509258 ZNF623O75123 536 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 DDHD2O94830 711 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 CXCL14O95715 111 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 CTSAP10619 480 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 SLC11A1P49279 550 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 RNASELQ05823 741 aaKnown RBP12.13□□□□□ -0.47
RNF4-212ENST00000509258 MBTD1Q05BQ5 628 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 IL17AQ16552 155 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 NOMO2Q5JPE7 1267 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 KIAA1841Q6NSI8 718 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 MAEAQ7L5Y9 396 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 SRGAP1Q7Z6B7 1085 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 MRPL10Q7Z7H8 261 aaKnown RBP12.13□□□□□ -0.47
RNF4-212ENST00000509258 DDX53Q86TM3 631 aaKnown RBP12.13□□□□□ -0.47
RNF4-212ENST00000509258 URGCPQ8TCY9 931 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 IGSF21Q96ID5 467 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 POLR3FQ9H1D9 316 aaPredicted RBP12.13□□□□□ -0.47
RNF4-212ENST00000509258 ANKEF1Q9NU02 776 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 MIOSQ9NXC5 875 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 USTQ9Y2C2 406 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 USP20Q9Y2K6 914 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 HES2Q9Y543 173 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 CITO14578 2027 aa12.13□□□□□ -0.47
RNF4-212ENST00000509258 ZFHX2Q9C0A1 2572 aaPredicted RBP12.13□□□□□ -0.47
RNF4-212ENST00000509258 DOCK8Q8NF50 2099 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 F8W810 466 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 EIF5BO60841 1220 aaKnown RBP12.12□□□□□ -0.47
RNF4-212ENST00000509258 BRD1O95696 1058 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 GALTP07902 379 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 OR52Z1P0C646 297 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 TTC38Q5R3I4 469 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 ATAT1Q5SQI0 421 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 RARS2Q5T160 578 aaKnown RBP12.12□□□□□ -0.47
RNF4-212ENST00000509258 KANK3Q6NY19 840 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 OTUD6AQ7L8S5 288 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 PPFIBP1Q86W92 1011 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 IFNLR1Q8IU57 520 aaPredicted RBP12.12□□□□□ -0.47
RNF4-212ENST00000509258 TCP11Q8WWU5 503 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 ATOH1Q92858 354 aaPredicted RBP12.12□□□□□ -0.47
RNF4-212ENST00000509258 GBP3Q9H0R5 595 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 CXCL16Q9H2A7 254 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 FOXP1Q9H334 677 aaPredicted RBP12.12□□□□□ -0.47
RNF4-212ENST00000509258 DBR1Q9UK59 544 aaKnown RBP12.12□□□□□ -0.47
RNF4-212ENST00000509258 PCDHB6Q9Y5E3 794 aa12.12□□□□□ -0.47
RNF4-212ENST00000509258 SPDYE4A6NLX3 237 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 PP2D1A8MPX8 630 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 GFRA3O60609 400 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 PDGFBP01127 241 aaPredicted RBP12.11□□□□□ -0.47
RNF4-212ENST00000509258 POMCP01189 267 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 ARF4P18085 180 aaPredicted RBP12.11□□□□□ -0.47
RNF4-212ENST00000509258 U2AF2P26368 475 aaKnown RBP eCLIP12.11□□□□□ -0.476e-8■□□□□ 9.9
RNF4-212ENST00000509258 NCBP1Q09161 790 aaKnown RBP12.11□□□□□ -0.47
RNF4-212ENST00000509258 PTPN14Q15678 1187 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 CABP7Q86V35 215 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 NOSTRINQ8IVI9 506 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 ZDHHC14Q8IZN3 488 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 CNNM3Q8NE01 707 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 ZSCAN31Q96LW9 406 aaPredicted RBP12.11□□□□□ -0.47
RNF4-212ENST00000509258 ZFP42Q96MM3 310 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 FAM193BQ96PV7 902 aaPredicted RBP12.11□□□□□ -0.47
RNF4-212ENST00000509258 NXF3Q9H4D5 531 aaKnown RBP12.11□□□□□ -0.47
RNF4-212ENST00000509258 SFXN1Q9H9B4 322 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 SH2B1Q9NRF2 756 aaPredicted RBP12.11□□□□□ -0.47
RNF4-212ENST00000509258 FAM86C1Q9NVL1 165 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 MARCH5Q9NX47 278 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 KANSL3Q9P2N6 904 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 CACNG4Q9UBN1 327 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 IPPQ9Y573 584 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 MYO15AQ9UKN7 3530 aa12.11□□□□□ -0.47
RNF4-212ENST00000509258 INO80B-WBP1J3KQ70 363 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 ASAP2O43150 1006 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
RNF4-212ENST00000509258 DGAT1O75907 488 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 WEE2P0C1S8 567 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 EPCAMP16422 314 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 NCLP19338 710 aaKnown RBP12.1□□□□□ -0.47
RNF4-212ENST00000509258 HMGN5P82970 282 aaKnown RBP12.1□□□□□ -0.47
RNF4-212ENST00000509258 PCBP1Q15365 356 aaKnown RBP eCLIP12.1□□□□□ -0.47
RNF4-212ENST00000509258 SAFBQ15424 915 aaKnown RBP eCLIP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms