RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 UPP2O95045 317 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 EYA4O95677 639 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 ACTN1P12814 892 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 CYP11B2P19099 503 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 PDCP20941 246 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 EIF4BP23588 611 aaKnown RBP8□□□□□ -1.13
TOPBP1-207ENST00000509162 PTENP60484 403 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 FAM189BP81408 668 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 DNM1Q05193 864 aaKnown RBP8□□□□□ -1.13
TOPBP1-207ENST00000509162 NFX1Q12986 1120 aaKnown RBP8□□□□□ -1.13
TOPBP1-207ENST00000509162 IKBKEQ14164 716 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 PDIA5Q14554 519 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 RAB30Q15771 203 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 FAM102BQ5T8I3 360 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 EEF1DP3Q658K8 133 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 HAUS3Q68CZ6 603 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 DTHD1Q6ZMT9 781 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 LRRC55Q6ZSA7 311 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 C1orf186Q6ZWK4 172 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 RSPH3Q86UC2 560 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 CABP7Q86V35 215 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 ZNF410Q86VK4 478 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 CDR2LQ86X02 465 aaPredicted RBP8□□□□□ -1.13
TOPBP1-207ENST00000509162 TMEM130Q8N3G9 435 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 RNF149Q8NC42 400 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 PRR7Q8TB68 274 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 BCL7CQ8WUZ0 217 aaPredicted RBP8□□□□□ -1.13
TOPBP1-207ENST00000509162 PSPC1Q8WXF1 523 aaKnown RBP8□□□□□ -1.13
TOPBP1-207ENST00000509162 SLC7A3Q8WY07 619 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 LPPQ93052 612 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 THAP11Q96EK4 314 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 ADAM2Q99965 735 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 EIF2AQ9BY44 585 aaKnown RBP8□□□□□ -1.13
TOPBP1-207ENST00000509162 IKZF4Q9H2S9 585 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 TFIP11Q9UBB9 837 aaKnown RBP8□□□□□ -1.13
TOPBP1-207ENST00000509162 PPME1Q9Y570 386 aa8□□□□□ -1.13
TOPBP1-207ENST00000509162 PRRC2BQ5JSZ5 2229 aaKnown RBP7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 C5orf42Q9H799 3197 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 ARHGEF35A5YM69 484 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 HIP1RO75146 1068 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 DGAT1O75907 488 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 AMHP03971 560 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 RPLP2P05387 115 aaKnown RBP7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 IBSPP21815 317 aaPredicted RBP7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 MUTP22033 750 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 DNAJB1P25685 340 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 PBX3P40426 434 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 KCNJ6P48051 423 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 SARSP49591 514 aaKnown RBP7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 ERVK-21P61565 698 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 SLC39A14Q15043 492 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 PAN2Q504Q3 1202 aaKnown RBP7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 ZNF697Q5TEC3 545 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 RINT1Q6NUQ1 792 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 TMEM173Q86WV6 379 aaPredicted RBP7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 ECHDC2Q86YB7 292 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 NPAS4Q8IUM7 802 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 SMG8Q8ND04 991 aaKnown RBP7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 RAD54LQ92698 747 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 CPB2Q96IY4 423 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 NACC1Q96RE7 527 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 HAPLN2Q9GZV7 340 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 CWH43Q9H720 699 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 PRDM6Q9NQX0 595 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 MTUS1Q9ULD2 1270 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 PCDHGC5Q9Y5F6 944 aa7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 SRPRBQ9Y5M8 271 aaKnown RBP7.99□□□□□ -1.13
TOPBP1-207ENST00000509162 BRWD1Q9NSI6 2320 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 TCHHQ07283 1943 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 F8W810 466 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 M0QZ92 97 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 GAS2O43903 313 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 DKC1O60832 514 aaKnown RBP eCLIP7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 EFCAB14O75071 495 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 YEATS4O95619 227 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 PLA2G4BP0C869 781 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 SRGAP2CP0DJJ0 459 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 XRCC6P12956 609 aaKnown RBP eCLIP7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 ARF4P18085 180 aaPredicted RBP7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 GUCY2CP25092 1073 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 LONP1P36776 959 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 RAD51AP2Q09MP3 1159 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 CAMK1Q14012 370 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 ZRSR1Q15695 479 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 LONRF3Q496Y0 759 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 NT5DC1Q5TFE4 455 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 KRT79Q5XKE5 535 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 DESI1Q6ICB0 168 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 AGMOQ6ZNB7 445 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 SYT2Q8N9I0 419 aaPredicted RBP7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 ERMNQ8TAM6 284 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 ARNTL2Q8WYA1 636 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 CLP1Q92989 425 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 CASD1Q96PB1 797 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 RAD9AQ99638 391 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 REEP2Q9BRK0 252 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 VN1R3Q9BXE9 311 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 NFKBIZQ9BYH8 718 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 CCSER1Q9C0I3 900 aa7.98□□□□□ -1.13
TOPBP1-207ENST00000509162 MTIF3Q9H2K0 278 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms