RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 SMAD4Q13485 552 aaKnown RBP20.61■□□□□ 0.89
UBE3D-207ENST00000509102 PRPF4BQ13523 1007 aaKnown RBP20.61■□□□□ 0.89
UBE3D-207ENST00000509102 CUL4AQ13619 759 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 GIT2Q14161 759 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 ECM1Q16610 540 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 AMHR2Q16671 573 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 DUSP6Q16828 381 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 SMG8Q8ND04 991 aaKnown RBP20.61■□□□□ 0.89
UBE3D-207ENST00000509102 ADPGKQ9BRR6 497 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 TMEM175Q9BSA9 504 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 APOL6Q9BWW8 343 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 PRKAG3Q9UGI9 489 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 GIT1Q9Y2X7 761 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 A0A1B0GUA9 196 aa20.6■□□□□ 0.89
UBE3D-207ENST00000509102 PP2D1A8MPX8 630 aa20.6■□□□□ 0.89
UBE3D-207ENST00000509102 N4BP3O15049 544 aa20.6■□□□□ 0.89
UBE3D-207ENST00000509102 B4GALT5O43286 388 aa20.6■□□□□ 0.89
UBE3D-207ENST00000509102 POMCP01189 267 aa20.6■□□□□ 0.89
UBE3D-207ENST00000509102 GALTP07902 379 aa20.6■□□□□ 0.89
UBE3D-207ENST00000509102 DLX2Q07687 328 aaPredicted RBP20.6■□□□□ 0.89
UBE3D-207ENST00000509102 FAM187BQ17R55 369 aa20.6■□□□□ 0.89
UBE3D-207ENST00000509102 APBB1IPQ7Z5R6 666 aaPredicted RBP20.6■□□□□ 0.89
UBE3D-207ENST00000509102 FAM178BQ8IXR5 827 aa20.6■□□□□ 0.89
UBE3D-207ENST00000509102 IGSF21Q96ID5 467 aa20.6■□□□□ 0.89
UBE3D-207ENST00000509102 DRC1Q96MC2 740 aa20.6■□□□□ 0.89
UBE3D-207ENST00000509102 POP1Q99575 1024 aaKnown RBP20.6■□□□□ 0.89
UBE3D-207ENST00000509102 FAN1Q9Y2M0 1017 aa20.6■□□□□ 0.89
UBE3D-207ENST00000509102 PHLPP2Q6ZVD8 1323 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 ARL5CA6NH57 179 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 NPTXRO95502 500 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 PRKCBP05771 671 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 LIG1P18858 919 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 MLH1P40692 756 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 IL17AQ16552 155 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 DDX53Q86TM3 631 aaKnown RBP20.59■□□□□ 0.89
UBE3D-207ENST00000509102 GJD3Q8N144 294 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 VPS52Q8N1B4 723 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 AK8Q96MA6 479 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 RPS6KC1Q96S38 1066 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 TIPINQ9BVW5 301 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 FZD8Q9H461 694 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 KCNG1Q9UIX4 513 aa20.59■□□□□ 0.89
UBE3D-207ENST00000509102 E9PMD0 336 aa20.58■□□□□ 0.89
UBE3D-207ENST00000509102 ACKR2O00590 384 aa20.58■□□□□ 0.89
UBE3D-207ENST00000509102 MBTPS2O43462 519 aa20.58■□□□□ 0.89
UBE3D-207ENST00000509102 CDC25AP30304 524 aa20.58■□□□□ 0.89
UBE3D-207ENST00000509102 SLC11A1P49279 550 aa20.58■□□□□ 0.89
UBE3D-207ENST00000509102 COASYQ13057 564 aa20.58■□□□□ 0.89
UBE3D-207ENST00000509102 DMP1Q13316 513 aaPredicted RBP20.58■□□□□ 0.89
UBE3D-207ENST00000509102 SMAD2Q15796 467 aaKnown RBP20.58■□□□□ 0.89
UBE3D-207ENST00000509102 ZNF280BQ86YH2 543 aa20.58■□□□□ 0.89
UBE3D-207ENST00000509102 MRPL43Q8N983 215 aaKnown RBP20.58■□□□□ 0.89
UBE3D-207ENST00000509102 GAD1Q99259 594 aa20.58■□□□□ 0.89
UBE3D-207ENST00000509102 NXF3Q9H4D5 531 aaKnown RBP20.58■□□□□ 0.89
UBE3D-207ENST00000509102 DNAJB4Q9UDY4 337 aa20.58■□□□□ 0.89
UBE3D-207ENST00000509102 PARP2Q9UGN5 583 aa20.58■□□□□ 0.89
UBE3D-207ENST00000509102 BARX2Q9UMQ3 279 aaPredicted RBP20.58■□□□□ 0.89
UBE3D-207ENST00000509102 HES2Q9Y543 173 aa20.58■□□□□ 0.89
UBE3D-207ENST00000509102 ZMYM2Q9UBW7 1377 aa20.58■□□□□ 0.88
UBE3D-207ENST00000509102 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.57■□□□□ 0.88
UBE3D-207ENST00000509102 CCDC169A6NNP5 214 aa20.57■□□□□ 0.88
UBE3D-207ENST00000509102 HIDE1A8MVS5 230 aa20.57■□□□□ 0.88
UBE3D-207ENST00000509102 SLC26A4O43511 780 aa20.57■□□□□ 0.88
UBE3D-207ENST00000509102 CXCL14O95715 111 aa20.57■□□□□ 0.88
UBE3D-207ENST00000509102 SSBP05455 408 aaKnown RBP eCLIP20.57■□□□□ 0.88
UBE3D-207ENST00000509102 UBA7P41226 1012 aa20.57■□□□□ 0.88
UBE3D-207ENST00000509102 CDR2LQ86X02 465 aaPredicted RBP20.57■□□□□ 0.88
UBE3D-207ENST00000509102 ADHFE1Q8IWW8 467 aa20.57■□□□□ 0.88
UBE3D-207ENST00000509102 RASSF8Q8NHQ8 419 aa20.57■□□□□ 0.88
UBE3D-207ENST00000509102 BSNDQ8WZ55 320 aa20.57■□□□□ 0.88
UBE3D-207ENST00000509102 CALML4Q96GE6 196 aa20.57■□□□□ 0.88
UBE3D-207ENST00000509102 INTS4Q96HW7 963 aaKnown RBP20.57■□□□□ 0.88
UBE3D-207ENST00000509102 MSLNLQ96KJ4 702 aa20.57■□□□□ 0.88
UBE3D-207ENST00000509102 C1QTNF1Q9BXJ1 281 aa20.57■□□□□ 0.88
UBE3D-207ENST00000509102 C17orf75Q9HAS0 396 aa20.57■□□□□ 0.88
UBE3D-207ENST00000509102 CLEC1BQ9P126 229 aa20.57■□□□□ 0.88
UBE3D-207ENST00000509102 MUC3AQ02505 3323 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 C2orf71A6NGG8 1288 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 K7ERI5 159 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 INPPL1O15357 1258 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 DDHD2O94830 711 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 AKAP5P24588 427 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 OR1G1P47890 313 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 SCNN1GP51170 649 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 DCAF4L1Q3SXM0 396 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 SMRP1Q8NCR6 262 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 CASP10Q92851 521 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 ZFP42Q96MM3 310 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 MMTAG2Q9BU76 263 aaKnown RBP20.56■□□□□ 0.88
UBE3D-207ENST00000509102 ZBP1Q9H171 429 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 KCND2Q9NZV8 630 aa20.56■□□□□ 0.88
UBE3D-207ENST00000509102 K7ELQ4 463 aaPredicted RBP20.55■□□□□ 0.88
UBE3D-207ENST00000509102 NRP1O14786 923 aa20.55■□□□□ 0.88
UBE3D-207ENST00000509102 HIP1RO75146 1068 aa20.55■□□□□ 0.88
UBE3D-207ENST00000509102 GLP2RO95838 553 aa20.55■□□□□ 0.88
UBE3D-207ENST00000509102 CTSAP10619 480 aa20.55■□□□□ 0.88
UBE3D-207ENST00000509102 HOXB8P17481 243 aaPredicted RBP20.55■□□□□ 0.88
UBE3D-207ENST00000509102 AFF1P51825 1210 aaKnown RBP20.55■□□□□ 0.88
UBE3D-207ENST00000509102 PEX3P56589 373 aa20.55■□□□□ 0.88
UBE3D-207ENST00000509102 GRIK3Q13003 919 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms