RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 SMG8Q8ND04 991 aaKnown RBP17.88■□□□□ 0.45
CXCL1-202ENST00000509101 PRPF31Q8WWY3 499 aaKnown RBP17.88■□□□□ 0.45
CXCL1-202ENST00000509101 KCNB2Q92953 911 aa17.88■□□□□ 0.45
CXCL1-202ENST00000509101 CEP170P1Q96L14 293 aa17.88■□□□□ 0.45
CXCL1-202ENST00000509101 MBOAT7Q96N66 472 aa17.88■□□□□ 0.45
CXCL1-202ENST00000509101 AGXT2Q9BYV1 514 aa17.88■□□□□ 0.45
CXCL1-202ENST00000509101 EPS15L1Q9UBC2 864 aa17.88■□□□□ 0.45
CXCL1-202ENST00000509101 DDX25Q9UHL0 483 aaKnown RBP17.88■□□□□ 0.45
CXCL1-202ENST00000509101 DPP7Q9UHL4 492 aa17.88■□□□□ 0.45
CXCL1-202ENST00000509101 PATJQ8NI35 1801 aa17.88■□□□□ 0.45
CXCL1-202ENST00000509101 OTOGLQ3ZCN5 2332 aa17.87■□□□□ 0.45
CXCL1-202ENST00000509101 SPATA31D3P0C874 917 aa17.87■□□□□ 0.45
CXCL1-202ENST00000509101 MLH1P40692 756 aa17.87■□□□□ 0.45
CXCL1-202ENST00000509101 QARSP47897 775 aaKnown RBP17.87■□□□□ 0.45
CXCL1-202ENST00000509101 LAMTOR4Q0VGL1 99 aa17.87■□□□□ 0.45
CXCL1-202ENST00000509101 MOXD1Q6UVY6 613 aa17.87■□□□□ 0.45
CXCL1-202ENST00000509101 CYP26C1Q6V0L0 522 aa17.87■□□□□ 0.45
CXCL1-202ENST00000509101 SPATA31D4Q6ZUB0 917 aa17.87■□□□□ 0.45
CXCL1-202ENST00000509101 GET4Q7L5D6 327 aaPredicted RBP17.87■□□□□ 0.45
CXCL1-202ENST00000509101 TRIM22Q8IYM9 498 aa17.87■□□□□ 0.45
CXCL1-202ENST00000509101 RNF168Q8IYW5 571 aaPredicted RBP17.87■□□□□ 0.45
CXCL1-202ENST00000509101 GPR152Q8TDT2 470 aa17.87■□□□□ 0.45
CXCL1-202ENST00000509101 ZNF707Q96C28 371 aaPredicted RBP17.87■□□□□ 0.45
CXCL1-202ENST00000509101 EIF2AQ9BY44 585 aaKnown RBP17.87■□□□□ 0.45
CXCL1-202ENST00000509101 RHOBTB2Q9BYZ6 727 aa17.87■□□□□ 0.45
CXCL1-202ENST00000509101 DHX33Q9H6R0 707 aaKnown RBP17.87■□□□□ 0.45
CXCL1-202ENST00000509101 WRAP73Q9P2S5 460 aaPredicted RBP17.87■□□□□ 0.45
CXCL1-202ENST00000509101 IPPQ9Y573 584 aa17.87■□□□□ 0.45
CXCL1-202ENST00000509101 CEP250Q9BV73 2442 aa17.87■□□□□ 0.45
CXCL1-202ENST00000509101 COL4A3Q01955 1670 aa17.87■□□□□ 0.45
CXCL1-202ENST00000509101 M0R2N6 131 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 ERLIN2O94905 339 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 DCNP07585 359 aaKnown RBP17.86■□□□□ 0.45
CXCL1-202ENST00000509101 PDIA3P30101 505 aaKnown RBP17.86■□□□□ 0.45
CXCL1-202ENST00000509101 SCNN1GP51170 649 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 EMC2Q15006 297 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 INF2Q27J81 1249 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 KIAA0319Q5VV43 1072 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 PALB2Q86YC2 1186 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 GLYCTKQ8IVS8 523 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 FBXL16Q8N461 479 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 RNF149Q8NC42 400 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 CNNM3Q8NE01 707 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 RMDN1Q96DB5 314 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 B3GALT6Q96L58 329 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 GAD1Q99259 594 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 SLKQ9H2G2 1235 aaPredicted RBP17.86■□□□□ 0.45
CXCL1-202ENST00000509101 RNF39Q9H2S5 420 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 SEMA4AQ9H3S1 761 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 PIDD1Q9HB75 910 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 RXFP1Q9HBX9 757 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 UBN1Q9NPG3 1134 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 ARHGEF3Q9NR81 526 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 VAV3Q9UKW4 847 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 HES2Q9Y543 173 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 CACNA1IQ9P0X4 2223 aa17.86■□□□□ 0.45
CXCL1-202ENST00000509101 ARL5CA6NH57 179 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 DKC1O60832 514 aaKnown RBP eCLIP17.85■□□□□ 0.45
CXCL1-202ENST00000509101 EFEMP2O95967 443 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 HSPA4P34932 840 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 RFC5P40937 340 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 DSG1Q02413 1049 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 DSC1Q08554 894 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 SSRP1Q08945 709 aaKnown RBP17.85■□□□□ 0.45
CXCL1-202ENST00000509101 PPP2R5CQ13362 524 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 NPY5RQ15761 445 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 KIAA2013Q8IYS2 634 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 DAGLBQ8NCG7 672 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 ST13P5Q8NFI4 369 aaPredicted RBP17.85■□□□□ 0.45
CXCL1-202ENST00000509101 NXPE3Q969Y0 559 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 CPB2Q96IY4 423 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 ZFP42Q96MM3 310 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 HINFPQ9BQA5 517 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 APOL6Q9BWW8 343 aa17.85■□□□□ 0.45
CXCL1-202ENST00000509101 MED19A0JLT2 244 aaPredicted RBP17.84■□□□□ 0.45
CXCL1-202ENST00000509101 TSPAN1O60635 241 aa17.84■□□□□ 0.45
CXCL1-202ENST00000509101 DEXIO95424 95 aa17.84■□□□□ 0.45
CXCL1-202ENST00000509101 P4HBP07237 508 aaKnown RBP17.84■□□□□ 0.45
CXCL1-202ENST00000509101 FERMT3Q86UX7 667 aa17.84■□□□□ 0.45
CXCL1-202ENST00000509101 EXOC8Q8IYI6 725 aa17.84■□□□□ 0.45
CXCL1-202ENST00000509101 TCP11Q8WWU5 503 aa17.84■□□□□ 0.45
CXCL1-202ENST00000509101 AIFM3Q96NN9 605 aa17.84■□□□□ 0.45
CXCL1-202ENST00000509101 LXNQ9BS40 222 aa17.84■□□□□ 0.45
CXCL1-202ENST00000509101 NT5C3AQ9H0P0 336 aa17.84■□□□□ 0.45
CXCL1-202ENST00000509101 MIOSQ9NXC5 875 aa17.84■□□□□ 0.45
CXCL1-202ENST00000509101 PPME1Q9Y570 386 aa17.84■□□□□ 0.45
CXCL1-202ENST00000509101 TGM5O43548 720 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 LAMP2P13473 410 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 YWHABP31946 246 aaKnown RBP17.83■□□□□ 0.44
CXCL1-202ENST00000509101 HTR4Q13639 388 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 PHLDB3Q6NSJ2 640 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 FUT10Q6P4F1 479 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 NOTUMQ6P988 496 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 ZC3H14Q6PJT7 736 aaKnown RBP17.83■□□□□ 0.44
CXCL1-202ENST00000509101 KRT25Q7Z3Z0 450 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 HDAC7Q8WUI4 952 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 FOXQ1Q9C009 403 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 NXF3Q9H4D5 531 aaKnown RBP17.83■□□□□ 0.44
CXCL1-202ENST00000509101 PLEKHA4Q9H4M7 779 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 KCNMB3Q9NPA1 279 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms