RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 NME8Q8N427 588 aa9.84□□□□□ -0.83
COL4A3BP-206ENST00000508809 KLHL23Q8NBE8 558 aa9.84□□□□□ -0.83
COL4A3BP-206ENST00000508809 CTCFLQ8NI51 663 aaPredicted RBP9.84□□□□□ -0.83
COL4A3BP-206ENST00000508809 POF1BQ8WVV4 589 aa9.84□□□□□ -0.83
COL4A3BP-206ENST00000508809 GLG1Q92896 1179 aa9.84□□□□□ -0.83
COL4A3BP-206ENST00000508809 TNPO1Q92973 898 aaKnown RBP9.84□□□□□ -0.83
COL4A3BP-206ENST00000508809 PPP2R3CQ969Q6 453 aa9.84□□□□□ -0.83
COL4A3BP-206ENST00000508809 SAP130Q9H0E3 1048 aa9.84□□□□□ -0.83
COL4A3BP-206ENST00000508809 STIM2Q9P246 746 aa9.84□□□□□ -0.83
COL4A3BP-206ENST00000508809 USTQ9Y2C2 406 aa9.84□□□□□ -0.83
COL4A3BP-206ENST00000508809 PCDHA2Q9Y5H9 948 aa9.84□□□□□ -0.83
COL4A3BP-206ENST00000508809 IGSF9BQ9UPX0 1349 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 PLXNA4Q9HCM2 1894 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 SMIM35A0A1B0GVV1 85 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 SGSM2O43147 1006 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 GLP2RO95838 553 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 STAG3L1P0CL83 205 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 NDUFV1P49821 464 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 PDE4CQ08493 712 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 MTMR1Q13613 665 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 PLCB4Q15147 1175 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 ADGRD2Q7Z7M1 963 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 TEX2Q8IWB9 1127 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 ATP8B4Q8TF62 1192 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 PIK3R5Q8WYR1 880 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 ZBTB10Q96DT7 871 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 CELF4Q9BZC1 486 aaKnown RBP9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 TMX1Q9H3N1 280 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 SEC63Q9UGP8 760 aaKnown RBP9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 PCDHA6Q9UN73 950 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 PCDHA8Q9Y5H6 950 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 TRPV2Q9Y5S1 764 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 VPS13AQ96RL7 3174 aa9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 MYH9P35579 1960 aaKnown RBP9.83□□□□□ -0.84
COL4A3BP-206ENST00000508809 NFASCO94856 1347 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 PLEKHA8P1O95397 391 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 RARAP10276 462 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 SCG2P13521 617 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 LIFRP42702 1097 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 IGBP1P78318 339 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 ZXDAP98168 799 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 UBE3AQ05086 875 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 KRT25Q7Z3Z0 450 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 EXOC6Q8TAG9 804 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 SUSD6Q92537 303 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 TMEM87BQ96K49 555 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 PRRX2Q99811 253 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 MYL10Q9BUA6 226 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 PHF7Q9BWX1 381 aaPredicted RBP9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 FAM49AQ9H0Q0 323 aaPredicted RBP9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 JPH1Q9HDC5 661 aaPredicted RBP9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 KCNH7Q9NS40 1196 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 SLC9A2Q9UBY0 812 aa9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 RIF1Q5UIP0 2472 aaKnown RBP9.82□□□□□ -0.84
COL4A3BP-206ENST00000508809 IGKV6D-21A0A0A0MT36 114 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 TMEM221A6NGB7 291 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 M0QZ92 97 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 M0R296 226 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 SH2B2O14492 632 aaPredicted RBP9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 XYLBO75191 536 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 MAP3K6O95382 1288 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 CALM1P0DP23 149 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 CALM2P0DP24 149 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 CALM3P0DP25 149 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 ATF7P17544 494 aaPredicted RBP9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 MCM5P33992 734 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 NRIP1P48552 1158 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 SARSP49591 514 aaKnown RBP9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 GSK3AP49840 483 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 SLC26A2P50443 739 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 STAT5BP51692 787 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 ACTR2P61160 394 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 TMEM62Q0P6H9 643 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 PAK2Q13177 524 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 KCNC3Q14003 757 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 UBE2SQ16763 222 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 CASC1Q6TDU7 716 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 MTHFD1LQ6UB35 978 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 TMEM184AQ6ZMB5 413 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 ETFBKMTQ8IXQ9 262 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 PRSS33Q8NF86 280 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 CYP2W1Q8TAV3 490 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 CDCA3Q99618 268 aaPredicted RBP9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 MDFIQ99750 246 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 MXRA8Q9BRK3 442 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 AZI2Q9H6S1 392 aa9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 FNDC3AQ9Y2H6 1198 aaKnown RBP9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 USP15Q9Y4E8 981 aaPredicted RBP9.81□□□□□ -0.84
COL4A3BP-206ENST00000508809 ZFHX2Q9C0A1 2572 aaPredicted RBP9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 WDR81Q562E7 1941 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 FSD2A1L4K1 749 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 C9IYK1 514 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 M0R082 166 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 MEIS1O00470 390 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 PRC1O43663 620 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 MGEA5O60502 916 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 ARP10275 920 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 GATMP50440 423 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 FAM189BP81408 668 aa9.8□□□□□ -0.84
COL4A3BP-206ENST00000508809 TCF15Q12870 199 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms