RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 LRRC45Q96CN5 670 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 IWS1Q96ST2 819 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 PSMB7Q99436 277 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 NFASCO94856 1347 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 PASKQ96RG2 1323 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 WDR81Q562E7 1941 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 SOWAHBA6NEL2 793 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 GOLGA6L10A6NI86 522 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 SLC16A4O15374 487 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 STBD1O95210 358 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 KIF4AO95239 1232 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 PGK2P07205 417 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 PSAPP07602 524 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 PSMC2P35998 433 aaKnown RBP11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 GJA5P36382 358 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 HSPA9P38646 679 aaKnown RBP11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 PRKCEQ02156 737 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 PPP2R5EQ16537 467 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 NFIL3Q16649 462 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 EXOC3L4Q17RC7 722 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 DPY19L2P1Q6NXN4 242 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 ABHD15Q6UXT9 468 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 EEPD1Q7L9B9 569 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 IRF2BP2Q7Z5L9 587 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 FAM133AQ8N9E0 248 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 RDH13Q8NBN7 331 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 BBXQ8WY36 941 aaPredicted RBP11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 ATP6V0A1Q93050 837 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 MS4A14Q96JA4 679 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 CEP170P1Q96L14 293 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 KRT12Q99456 494 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 ZNF408Q9H9D4 720 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 ANKEF1Q9NU02 776 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 DMAC2Q9NW81 257 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 FBXO40Q9UH90 709 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 NFU1Q9UMS0 254 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 DIS3Q9Y2L1 958 aaKnown RBP11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 TRIM49P0CI25 452 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 TRIM49CP0CI26 452 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 UCHL3P15374 230 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 FERP16591 822 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 PON1P27169 355 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 CARSP49589 748 aaKnown RBP11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 ARID5AQ03989 594 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 Q3C1V9 767 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 TTMPQ5BVD1 217 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 HAUS6Q7Z4H7 955 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 TADA2BQ86TJ2 420 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 SCFD2Q8WU76 684 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 IFT81Q8WYA0 676 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 CBWD1Q9BRT8 395 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 PCIF1Q9H4Z3 704 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 GCNT4Q9P109 453 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 RBPJLQ9UBG7 517 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 SEPT9Q9UHD8 586 aaPredicted RBP11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 GGA2Q9UJY4 613 aa11.92□□□□□ -0.5
SH3RF1-203ENST00000508685 EXOC3O60645 756 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 FTCDO95954 541 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 CCDC172P0C7W6 258 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 UBA1P22314 1058 aaKnown RBP11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 PTK2Q05397 1052 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 MTMR3Q13615 1198 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 ALKBH5Q6P6C2 394 aaKnown RBP11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 C3orf20Q8ND61 904 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 ZSWIM2Q8NEG5 633 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 CCDC26Q8TAB7 109 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 BSNDQ8WZ55 320 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 ARL8AQ96BM9 186 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 ATP6V1G3Q96LB4 118 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 SLITRK6Q9H5Y7 841 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 SUCLA2Q9P2R7 463 aaPredicted RBP11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 NAGPAQ9UK23 515 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 FRMD4BQ9Y2L6 1034 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 GRIN2DO15399 1336 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 CCDC169A6NNP5 214 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 PGRMC1O00264 195 aaKnown RBP11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 H2AFZP0C0S5 128 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 SUPT20HL2P0C7V6 817 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 MAPTP10636 758 aaKnown RBP11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 EDNRBP24530 442 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 ICAM3P32942 547 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 NPTX2P47972 431 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 CCT5P48643 541 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 NCKAP1LP55160 1127 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 GTF2BQ00403 316 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 ENOX2Q16206 610 aaKnown RBP11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 CBWD6Q4V339 395 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 CBWD3Q5JTY5 395 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 CBWD5Q5RIA9 395 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 GPAT2Q6NUI2 795 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 RUFY4Q6ZNE9 571 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 H2AFVQ71UI9 128 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 OTUD6AQ7L8S5 288 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 ARMC9Q7Z3E5 817 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 MAATS1Q7Z4T9 603 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 SLFN11Q7Z7L1 901 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 CASKIN2Q8WXE0 1202 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 MKNK1Q9BUB5 465 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 TIPINQ9BVW5 301 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms