RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 BMP8AQ7Z5Y6 402 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 MRGPRGQ86SM5 289 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 ELF4Q99607 663 aaPredicted RBP5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 GPR87Q9BY21 358 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 B4GALT6Q9UBX8 382 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 RAB3GAP2Q9H2M9 1393 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 VWDEQ8N2E2 1590 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 CEP170BQ9Y4F5 1589 aaPredicted RBP5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 CTTNBP2Q8WZ74 1663 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 CBX4O00257 560 aa5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 FAM20BO75063 409 aa5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 APOL3O95236 402 aa5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 JMJD7P0C870 316 aa5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 BCAR1P56945 870 aa5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 IRX6P78412 446 aaPredicted RBP5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 TOB2Q14106 344 aaPredicted RBP5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 ESRP1Q6NXG1 681 aaKnown RBP5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 NPM2Q86SE8 214 aaKnown RBP5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 NME9Q86XW9 330 aa5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 ELOA2Q8IYF1 753 aaPredicted RBP5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 MB21D1Q8N884 522 aa5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 ARL8AQ96BM9 186 aa5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 PGBD4Q96DM1 585 aa5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 HAPLN2Q9GZV7 340 aa5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 KANSL2Q9H9L4 492 aa5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 GPRC5BQ9NZH0 403 aa5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 KTN1Q86UP2 1357 aaKnown RBP5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 NPHP4O75161 1426 aaPredicted RBP5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 ZNF518AQ6AHZ1 1483 aa5.62□□□□□ -1.51
PDLIM5-211ENST00000508531 PPP1R12AO14974 1030 aaPredicted RBP5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 JUNP05412 331 aaKnown RBP5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 AGLP35573 1532 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 FLT3P36888 993 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 XDHP47989 1333 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 RABGGTBP53611 331 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 ADCY2Q08462 1091 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 CDCA2Q69YH5 1023 aaPredicted RBP5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 UBE2R2Q712K3 238 aaPredicted RBP5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 ABCA6Q8N139 1617 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 C7orf31Q8N865 590 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 MYO3AQ8NEV4 1616 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 ATXN2LQ8WWM7 1075 aaKnown RBP5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 AGAP2Q99490 1192 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 GTPBP4Q9BZE4 634 aaKnown RBP5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 NRDE2Q9H7Z3 1164 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 TOMM22Q9NS69 142 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 PRDM4Q9UKN5 801 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 DMRT1Q9Y5R6 373 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 SETBP1Q9Y6X0 1596 aa5.61□□□□□ -1.51
PDLIM5-211ENST00000508531 POLR1AO95602 1720 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 DNMT1P26358 1616 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 NEURL4Q96JN8 1562 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 A2ML1A8K2U0 1454 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 FAM135BQ49AJ0 1406 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 KLRG2A4D1S0 409 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 RAMP2O60895 175 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 PRPF6O94906 941 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 LETM1O95202 739 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 KRT4P19013 534 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 KIR2DL3P43628 341 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 SMAD3P84022 425 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 ADCY1Q08828 1119 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 NFE2L2Q16236 605 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 CREB3L3Q68CJ9 461 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 UNQ6494/PRO21346Q6UXR6 183 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 Q6ZPA2 131 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 KANSL1Q7Z3B3 1105 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 PHYKPLQ8IUZ5 450 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 ULK2Q8IYT8 1036 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 SH3TC2Q8TF17 1288 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 RTF1Q92541 710 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 ZNF512Q96ME7 567 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 TTPALQ9BTX7 342 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 MYL10Q9BUA6 226 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 PITHD1Q9GZP4 211 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 POFUT1Q9H488 388 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 MTG2Q9H4K7 406 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 MYH16Q9H6N6 1097 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 C14orf93Q9H972 538 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 OXSMQ9NWU1 459 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 H2AFY2Q9P0M6 372 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 SYNPO2Q9UMS6 1093 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 STRCP1A6NGW2 1772 aa5.6□□□□□ -1.51
PDLIM5-211ENST00000508531 CLTCQ00610 1675 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 ARHGAP5Q13017 1502 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 CDK13Q14004 1512 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 INSRP06213 1382 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 A0A0A6YYJ9 748 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 MFAP3LO75121 409 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 STC2O76061 302 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 ASMTLO95671 621 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 CDK11BP21127 795 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 HNRNPMP52272 730 aaKnown RBP eCLIP5.59□□□□□ -1.515e-6■■■□□ 18.5
PDLIM5-211ENST00000508531 NPEPPSP55786 919 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 NANOS3P60323 173 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 PABPC4Q13310 644 aaKnown RBP eCLIP5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 CFAP100Q494V2 611 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 C1QL3Q5VWW1 255 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 MFSD5Q6N075 450 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms