RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 SSBP05455 408 aaKnown RBP eCLIP21.91■■□□□ 1.1
SFXN1-209ENST00000508290 DNAJB1P25685 340 aa21.91■■□□□ 1.1
SFXN1-209ENST00000508290 NPTX2P47972 431 aa21.91■■□□□ 1.1
SFXN1-209ENST00000508290 PEX3P56589 373 aa21.91■■□□□ 1.1
SFXN1-209ENST00000508290 DCAF4L1Q3SXM0 396 aa21.91■■□□□ 1.1
SFXN1-209ENST00000508290 LEXMQ3ZCV2 418 aa21.91■■□□□ 1.1
SFXN1-209ENST00000508290 DAW1Q8N136 415 aa21.91■■□□□ 1.1
SFXN1-209ENST00000508290 MICAL1Q8TDZ2 1067 aa21.91■■□□□ 1.1
SFXN1-209ENST00000508290 ZNF396Q96N95 335 aaPredicted RBP21.91■■□□□ 1.1
SFXN1-209ENST00000508290 KMT5AQ9NQR1 393 aa21.91■■□□□ 1.1
SFXN1-209ENST00000508290 LARSQ9P2J5 1176 aaKnown RBP21.91■■□□□ 1.1
SFXN1-209ENST00000508290 HCSTQ9UBK5 93 aa21.91■■□□□ 1.1
SFXN1-209ENST00000508290 CCDC39Q9UFE4 941 aa21.91■■□□□ 1.1
SFXN1-209ENST00000508290 CCDC169A6NNP5 214 aa21.9■■□□□ 1.1
SFXN1-209ENST00000508290 MEIS3P2A8K0S8 358 aa21.9■■□□□ 1.1
SFXN1-209ENST00000508290 NR1I2O75469 434 aa21.9■■□□□ 1.1
SFXN1-209ENST00000508290 ABCD1P33897 745 aa21.9■■□□□ 1.1
SFXN1-209ENST00000508290 GIT2Q14161 759 aa21.9■■□□□ 1.1
SFXN1-209ENST00000508290 SLC39A14Q15043 492 aa21.9■■□□□ 1.1
SFXN1-209ENST00000508290 CTC1Q2NKJ3 1217 aa21.9■■□□□ 1.1
SFXN1-209ENST00000508290 COL25A1Q9BXS0 654 aaPredicted RBP21.9■■□□□ 1.1
SFXN1-209ENST00000508290 NRDE2Q9H7Z3 1164 aa21.9■■□□□ 1.1
SFXN1-209ENST00000508290 ARHGAP28Q9P2N2 729 aa21.9■■□□□ 1.1
SFXN1-209ENST00000508290 FBXO2Q9UK22 296 aaPredicted RBP21.9■■□□□ 1.1
SFXN1-209ENST00000508290 A0A0C4DFX4 3053 aa21.89■■□□□ 1.1
SFXN1-209ENST00000508290 ARL5CA6NH57 179 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 FSCN2O14926 492 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 NPTXRO95502 500 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 ALDH2P05091 517 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 SRGAP2BP0DMP2 458 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 PLS3P13797 630 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 KCNA5P22460 613 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 NASPP49321 788 aaPredicted RBP21.89■■□□□ 1.09
SFXN1-209ENST00000508290 TFF2Q03403 129 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 HYAL1Q12794 435 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 MAPK7Q13164 816 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 LONRF3Q496Y0 759 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 EFHBQ8N7U6 833 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 KRI1Q8N9T8 703 aaKnown RBP21.89■■□□□ 1.09
SFXN1-209ENST00000508290 KCNN1Q92952 543 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 NXF3Q9H4D5 531 aaKnown RBP21.89■■□□□ 1.09
SFXN1-209ENST00000508290 PDZD7Q9H5P4 517 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 STK17AQ9UEE5 414 aa21.89■■□□□ 1.09
SFXN1-209ENST00000508290 GALTP07902 379 aa21.88■■□□□ 1.09
SFXN1-209ENST00000508290 BMP1P13497 986 aa21.88■■□□□ 1.09
SFXN1-209ENST00000508290 ATL3Q6DD88 541 aa21.88■■□□□ 1.09
SFXN1-209ENST00000508290 RAD54LQ92698 747 aa21.88■■□□□ 1.09
SFXN1-209ENST00000508290 IGSF21Q96ID5 467 aa21.88■■□□□ 1.09
SFXN1-209ENST00000508290 USP28Q96RU2 1077 aa21.88■■□□□ 1.09
SFXN1-209ENST00000508290 TCF25Q9BQ70 676 aa21.88■■□□□ 1.09
SFXN1-209ENST00000508290 MRPL4Q9BYD3 311 aaKnown RBP21.88■■□□□ 1.09
SFXN1-209ENST00000508290 TLE6Q9H808 572 aa21.88■■□□□ 1.09
SFXN1-209ENST00000508290 ENTPD7Q9NQZ7 604 aa21.88■■□□□ 1.09
SFXN1-209ENST00000508290 CLDND1Q9NY35 253 aa21.88■■□□□ 1.09
SFXN1-209ENST00000508290 TNFSF13BQ9Y275 285 aa21.88■■□□□ 1.09
SFXN1-209ENST00000508290 ZSCAN22P10073 491 aaPredicted RBP21.87■■□□□ 1.09
SFXN1-209ENST00000508290 PLCG1P19174 1290 aa21.87■■□□□ 1.09
SFXN1-209ENST00000508290 IRS1P35568 1242 aa21.87■■□□□ 1.09
SFXN1-209ENST00000508290 MLH1P40692 756 aa21.87■■□□□ 1.09
SFXN1-209ENST00000508290 GRIK3Q13003 919 aa21.87■■□□□ 1.09
SFXN1-209ENST00000508290 STRN3Q13033 797 aa21.87■■□□□ 1.09
SFXN1-209ENST00000508290 SMC1AQ14683 1233 aaKnown RBP21.87■■□□□ 1.09
SFXN1-209ENST00000508290 ATF7IP2Q5U623 682 aa21.87■■□□□ 1.09
SFXN1-209ENST00000508290 TMC7Q7Z402 723 aa21.87■■□□□ 1.09
SFXN1-209ENST00000508290 DDX53Q86TM3 631 aaKnown RBP21.87■■□□□ 1.09
SFXN1-209ENST00000508290 ADAMTS19Q8TE59 1207 aa21.87■■□□□ 1.09
SFXN1-209ENST00000508290 LARP4BQ92615 738 aaKnown RBP21.87■■□□□ 1.09
SFXN1-209ENST00000508290 RPS6KC1Q96S38 1066 aa21.87■■□□□ 1.09
SFXN1-209ENST00000508290 GAD1Q99259 594 aa21.87■■□□□ 1.09
SFXN1-209ENST00000508290 PLIN2Q99541 437 aa21.87■■□□□ 1.09
SFXN1-209ENST00000508290 KIFC3Q9BVG8 833 aa21.87■■□□□ 1.09
SFXN1-209ENST00000508290 HES2Q9Y543 173 aa21.87■■□□□ 1.09
SFXN1-209ENST00000508290 YEATS4O95619 227 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 LIG1P18858 919 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 MARCKSP29966 332 aaPredicted RBP21.86■■□□□ 1.09
SFXN1-209ENST00000508290 DDIT3P35638 169 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 PBX3P40426 434 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 ERVFC1P60507 584 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 GRIN1Q05586 938 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 KARSQ15046 597 aaKnown RBP21.86■■□□□ 1.09
SFXN1-209ENST00000508290 STK38Q15208 465 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 FAM173BQ6P4H8 233 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 GPBP1Q86WP2 473 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 APOL6Q9BWW8 343 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 GBP3Q9H0R5 595 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 RNF39Q9H2S5 420 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 BLOC1S4Q9NUP1 217 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 FAN1Q9Y2M0 1017 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 IRAK3Q9Y616 596 aa21.86■■□□□ 1.09
SFXN1-209ENST00000508290 PPP6R2O75170 966 aa21.85■■□□□ 1.09
SFXN1-209ENST00000508290 POMCP01189 267 aa21.85■■□□□ 1.09
SFXN1-209ENST00000508290 KRT18P05783 430 aaKnown RBP21.85■■□□□ 1.09
SFXN1-209ENST00000508290 NRIP1P48552 1158 aa21.85■■□□□ 1.09
SFXN1-209ENST00000508290 SLC11A1P49279 550 aa21.85■■□□□ 1.09
SFXN1-209ENST00000508290 CEBPZQ03701 1054 aaKnown RBP21.85■■□□□ 1.09
SFXN1-209ENST00000508290 DSC1Q08554 894 aa21.85■■□□□ 1.09
SFXN1-209ENST00000508290 ADAM15Q13444 863 aa21.85■■□□□ 1.09
SFXN1-209ENST00000508290 CCDC73Q6ZRK6 1079 aa21.85■■□□□ 1.09
SFXN1-209ENST00000508290 ZNF280BQ86YH2 543 aa21.85■■□□□ 1.09
SFXN1-209ENST00000508290 PARVGQ9HBI0 331 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms