RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 ARHGAP26Q9UNA1 814 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 DTNAQ9Y4J8 743 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 ATP23Q9Y6H3 246 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 SESN1Q9Y6P5 492 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 SLC4A4Q9Y6R1 1079 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 URB2Q14146 1524 aaKnown RBP8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 NT5C1B-RDH14C9J2C7 533 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 TRIM38O00635 465 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 PRODHO43272 600 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 UBXN7O94888 489 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 PCNAP12004 261 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 ALOX15P16050 662 aaPredicted RBP8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 LAG3P18627 525 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 KELP23276 732 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 SCAND1P57086 179 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 ADCY2Q08462 1091 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 CUL2Q13617 745 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 CNN3Q15417 329 aaKnown RBP8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 ADIPOQQ15848 244 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 CLPPQ16740 277 aaPredicted RBP8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 ZACNQ401N2 412 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 CHRDL2Q6WN34 429 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 DTHD1Q6ZMT9 781 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 CHD1LQ86WJ1 897 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 ZNF280CQ8ND82 737 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 GRIN3AQ8TCU5 1115 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 LRTOMTQ8WZ04 291 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 BSNDQ8WZ55 320 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 ORAI3Q9BRQ5 295 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 PLVAPQ9BX97 442 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 ACPTQ9BZG2 426 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 MIR1-1HGQ9H1L0 117 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 LATS2Q9NRM7 1088 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 EXTL2Q9UBQ6 330 aa8.17□□□□□ -1.1
PDGFRA-206ENST00000508170 DNMBPQ6XZF7 1577 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 ZSCAN22P10073 491 aaPredicted RBP8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 ACRP10323 421 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 ZNF24P17028 368 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 TLX1P31314 330 aaPredicted RBP8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 IDUAP35475 653 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 RPS26P62854 115 aaKnown RBP8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 COG2Q14746 738 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 METTL11BQ5VVY1 283 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 NSMFQ6X4W1 530 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 UNC5AQ6ZN44 842 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 IKBIPQ70UQ0 350 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 ARMC9Q7Z3E5 817 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 ANKLE2Q86XL3 938 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 TMCO5AQ8N6Q1 288 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 TSPYL6Q8N831 410 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 RFWD2Q8NHY2 731 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 NRBF2Q96F24 287 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 VPS50Q96JG6 964 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 TSEN34Q9BSV6 310 aaKnown RBP8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 SENP2Q9HC62 589 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 PDE11AQ9HCR9 933 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 HPS4Q9NQG7 708 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 PADI4Q9UM07 663 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 BCS1LQ9Y276 419 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 SLC12A7Q9Y666 1083 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 TIAM1Q13009 1591 aa8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 SPAG9O60271 1321 aaKnown RBP8.16□□□□□ -1.1
PDGFRA-206ENST00000508170 TSHRP16473 764 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 ALDH9A1P49189 494 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 PPP5CP53041 499 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 HTD2P86397 168 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 TLE2Q04725 743 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 KIF5AQ12840 1032 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 NMIQ13287 307 aaPredicted RBP8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 ACVR2BQ13705 512 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 TRIP4Q15650 581 aaPredicted RBP8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 C15orf59Q2T9L4 293 aaPredicted RBP8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 ATG9AQ7Z3C6 839 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 KRT73Q86Y46 540 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 SEPT12Q8IYM1 358 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 SLC7A5P1Q8MH63 180 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 KRT222Q8N1A0 295 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 DENND6BQ8NEG7 585 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 NEDD1Q8NHV4 660 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 PIGOQ8TEQ8 1089 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 HDAC7Q8WUI4 952 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 LRFN3Q9BTN0 628 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 EMILIN2Q9BXX0 1053 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 C1orf21Q9H246 121 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 CLSTN2Q9H4D0 955 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 PHAXQ9H814 394 aaKnown RBP8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 SIRT5Q9NXA8 310 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 POM121BA6NF01 834 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 UBAP1LF5GYI3 381 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 NPC1O15118 1278 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 MLYCDO95822 493 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 COL6A2P12110 1019 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 CA8P35219 290 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 EPS15P42566 896 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 HSPA7P48741 367 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 IKQ13123 557 aaPredicted RBP8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 NFE2L1Q14494 772 aa8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 MXD4Q14582 209 aaPredicted RBP8.15□□□□□ -1.1
PDGFRA-206ENST00000508170 PLS1Q14651 629 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms