RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 SEC23AQ15436 765 aa6.59□□□□□ -1.35
KDM3B-204ENST00000507996 CERKLQ49MI3 558 aaPredicted RBP6.59□□□□□ -1.35
KDM3B-204ENST00000507996 CEP128Q6ZU80 1094 aa6.59□□□□□ -1.35
KDM3B-204ENST00000507996 SLC15A3Q8IY34 581 aa6.59□□□□□ -1.35
KDM3B-204ENST00000507996 LRRC47Q8N1G4 583 aaKnown RBP6.59□□□□□ -1.35
KDM3B-204ENST00000507996 FANCBQ8NB91 859 aa6.59□□□□□ -1.35
KDM3B-204ENST00000507996 LSM14AQ8ND56 463 aaKnown RBP6.59□□□□□ -1.35
KDM3B-204ENST00000507996 ACTRT1Q8TDG2 376 aa6.59□□□□□ -1.35
KDM3B-204ENST00000507996 DIS3LQ8TF46 1054 aaKnown RBP6.59□□□□□ -1.35
KDM3B-204ENST00000507996 DYDC1Q8WWB3 177 aa6.59□□□□□ -1.35
KDM3B-204ENST00000507996 NELFBQ8WX92 580 aa6.59□□□□□ -1.35
KDM3B-204ENST00000507996 CENPKQ9BS16 269 aa6.59□□□□□ -1.35
KDM3B-204ENST00000507996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.59□□□□□ -1.352e-8■■■■□ 26
KDM3B-204ENST00000507996 PICK1Q9NRD5 415 aa6.59□□□□□ -1.35
KDM3B-204ENST00000507996 HACL1Q9UJ83 578 aa6.59□□□□□ -1.35
KDM3B-204ENST00000507996 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.59□□□□□ -1.35
KDM3B-204ENST00000507996 MYH10P35580 1976 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 A0A0J9YVX5 310 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 CCDC188H7C350 402 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 MMP1P03956 469 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 ZBTB48P10074 688 aaPredicted RBP6.58□□□□□ -1.36
KDM3B-204ENST00000507996 GM2AP17900 193 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 RPS12P25398 132 aaKnown RBP6.58□□□□□ -1.36
KDM3B-204ENST00000507996 SHMT1P34896 483 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 SERPINB4P48594 390 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 ACADVLP49748 655 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 CDK7P50613 346 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 KIF11P52732 1056 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 GSTM4Q03013 218 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 ITGA9Q13797 1035 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 CNGA2Q16280 664 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 BCL2A1Q16548 175 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 KRT71Q3SY84 523 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 LIN52Q52LA3 116 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 ANGEL2Q5VTE6 544 aaKnown RBP6.58□□□□□ -1.36
KDM3B-204ENST00000507996 KLHL10Q6JEL2 608 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 SGMS1Q86VZ5 419 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 NELFCDQ8IXH7 590 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 SAMD3Q8N6K7 520 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 FITM2Q8N6M3 262 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 ANKLE1Q8NAG6 615 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 PNMA1Q8ND90 353 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 FAM13CQ8NE31 585 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 MDM1Q8TC05 714 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 TRPM4Q8TD43 1214 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 WASF1Q92558 559 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 FERMT2Q96AC1 680 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 AIFM3Q96NN9 605 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 STMN4Q9H169 189 aaPredicted RBP6.58□□□□□ -1.36
KDM3B-204ENST00000507996 CSRNP2Q9H175 543 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 NEUROG2Q9H2A3 272 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 EPB41L4BQ9H329 900 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 SLITRK6Q9H5Y7 841 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 NDUFA13Q9P0J0 144 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 PNMA2Q9UL42 364 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 SYNPO2Q9UMS6 1093 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 FZD1Q9UP38 647 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 NR2E3Q9Y5X4 410 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 CDK5RAP2Q96SN8 1893 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 SSU72P8A0A1W2PR75 194 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 CCDC162PA2VCL2 907 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 ENTPD3O75355 529 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 BMP15O95972 392 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 MYBL1P10243 752 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 TNNI2P48788 182 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 PRPF4BQ13523 1007 aaKnown RBP6.58□□□□□ -1.36
KDM3B-204ENST00000507996 TRIM29Q14134 588 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 MUM1Q2TAK8 710 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 MFSD5Q6N075 450 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 GPC2Q8N158 579 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 KIF2BQ8N4N8 673 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 FAM151AQ8WW52 585 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 GFM2Q969S9 779 aaKnown RBP6.58□□□□□ -1.36
KDM3B-204ENST00000507996 GRAMD1AQ96CP6 724 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 MS4A14Q96JA4 679 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 CCDC42Q96M95 316 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 NUDCD1Q96RS6 583 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 TMEM47Q9BQJ4 181 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 EDEM3Q9BZQ6 932 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 DNAJC18Q9H819 358 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 VAT1LQ9HCJ6 419 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 AGPAT5Q9NUQ2 364 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 INTS9Q9NV88 658 aaKnown RBP6.58□□□□□ -1.36
KDM3B-204ENST00000507996 ARHGAP20Q9P2F6 1191 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.58□□□□□ -1.36
KDM3B-204ENST00000507996 MYH6P13533 1939 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 ARFGEF1Q9Y6D6 1849 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 CCDC169A6NNP5 214 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 NCK2O43639 380 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 HNRNPCL1O60812 293 aaKnown RBP6.58□□□□□ -1.36
KDM3B-204ENST00000507996 PFDN1O60925 122 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 ATP9AO75110 1047 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 GFPT2O94808 682 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 PLEKHA8P1O95397 391 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 SHBGP04278 402 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 VARSP26640 1264 aaKnown RBP6.58□□□□□ -1.36
KDM3B-204ENST00000507996 CLCN2P51788 898 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 CYP27A1Q02318 531 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 GABPAQ06546 454 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 SSRP1Q08945 709 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms