RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 XXYLT1Q8NBI6 393 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 ACO2Q99798 780 aaKnown RBP19.09■□□□□ 0.65
RNF4-209ENST00000507784 VPS16Q9H269 839 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 DMAC2Q9NW81 257 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 ANKFY1Q9P2R3 1169 aa19.09■□□□□ 0.65
RNF4-209ENST00000507784 LIMA1Q9UHB6 759 aaKnown RBP19.09■□□□□ 0.65
RNF4-209ENST00000507784 TTLL13PA6NNM8 815 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 CBFA2T2O43439 604 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 ADCY5O95622 1261 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 IQCF3P0C7M6 154 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 PRKCSHP14314 528 aaPredicted RBP19.08■□□□□ 0.64
RNF4-209ENST00000507784 DARSP14868 501 aaKnown RBP19.08■□□□□ 0.64
RNF4-209ENST00000507784 GARTP22102 1010 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 PSMC2P35998 433 aaKnown RBP19.08■□□□□ 0.64
RNF4-209ENST00000507784 CDK7P50613 346 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 NCBP1Q09161 790 aaKnown RBP19.08■□□□□ 0.64
RNF4-209ENST00000507784 SNX17Q15036 470 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 FAM187BQ17R55 369 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 ATF7IP2Q5U623 682 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 SARM1Q6SZW1 724 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 C12orf56Q8IXR9 622 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 FAM186BQ8IYM0 893 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 SAAL1Q96ER3 474 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 CPB2Q96IY4 423 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 CTAGE1Q96RT6 745 aa19.08■□□□□ 0.64
RNF4-209ENST00000507784 SLC16A3O15427 465 aaKnown RBP19.07■□□□□ 0.64
RNF4-209ENST00000507784 TLR3O15455 904 aaKnown RBP19.07■□□□□ 0.64
RNF4-209ENST00000507784 CLDN3O15551 220 aa19.07■□□□□ 0.64
RNF4-209ENST00000507784 AKAP3O75969 853 aa19.07■□□□□ 0.64
RNF4-209ENST00000507784 SFPQP23246 707 aaKnown RBP eCLIP19.07■□□□□ 0.64
RNF4-209ENST00000507784 EIF4BP23588 611 aaKnown RBP19.07■□□□□ 0.64
RNF4-209ENST00000507784 ADSSP30520 456 aa19.07■□□□□ 0.64
RNF4-209ENST00000507784 MNX1P50219 401 aaPredicted RBP19.07■□□□□ 0.64
RNF4-209ENST00000507784 ZNF75DP51815 510 aa19.07■□□□□ 0.64
RNF4-209ENST00000507784 COPB1P53618 953 aaKnown RBP19.07■□□□□ 0.64
RNF4-209ENST00000507784 SLC39A5Q6ZMH5 540 aa19.07■□□□□ 0.64
RNF4-209ENST00000507784 CDR2LQ86X02 465 aaPredicted RBP19.07■□□□□ 0.64
RNF4-209ENST00000507784 ANKLE1Q8NAG6 615 aa19.07■□□□□ 0.64
RNF4-209ENST00000507784 DIS3LQ8TF46 1054 aaKnown RBP19.07■□□□□ 0.64
RNF4-209ENST00000507784 DHX38Q92620 1227 aaKnown RBP19.07■□□□□ 0.64
RNF4-209ENST00000507784 PRIMPOLQ96LW4 560 aa19.07■□□□□ 0.64
RNF4-209ENST00000507784 NAP1L5Q96NT1 182 aaPredicted RBP19.07■□□□□ 0.64
RNF4-209ENST00000507784 TUBGCP2Q9BSJ2 902 aa19.07■□□□□ 0.64
RNF4-209ENST00000507784 MSTO1Q9BUK6 570 aa19.07■□□□□ 0.64
RNF4-209ENST00000507784 NOC4LQ9BVI4 516 aaKnown RBP19.07■□□□□ 0.64
RNF4-209ENST00000507784 XPO4Q9C0E2 1151 aaKnown RBP19.07■□□□□ 0.64
RNF4-209ENST00000507784 AGO2Q9UKV8 859 aaKnown RBP19.07■□□□□ 0.64
RNF4-209ENST00000507784 N4BP3O15049 544 aa19.06■□□□□ 0.64
RNF4-209ENST00000507784 TSPAN1O60635 241 aa19.06■□□□□ 0.64
RNF4-209ENST00000507784 PQBP1O60828 265 aaKnown RBP19.06■□□□□ 0.64
RNF4-209ENST00000507784 TOM1L1O75674 476 aa19.06■□□□□ 0.64
RNF4-209ENST00000507784 CHRNA1P02708 482 aa19.06■□□□□ 0.64
RNF4-209ENST00000507784 AMHR2Q16671 573 aa19.06■□□□□ 0.64
RNF4-209ENST00000507784 TSHZ1Q6ZSZ6 1077 aa19.06■□□□□ 0.64
RNF4-209ENST00000507784 FRMD5Q7Z6J6 570 aa19.06■□□□□ 0.64
RNF4-209ENST00000507784 RPAINQ86UA6 219 aa19.06■□□□□ 0.64
RNF4-209ENST00000507784 GPD1LQ8N335 351 aa19.06■□□□□ 0.64
RNF4-209ENST00000507784 ZSWIM2Q8NEG5 633 aa19.06■□□□□ 0.64
RNF4-209ENST00000507784 FAM213AQ9BRX8 229 aa19.06■□□□□ 0.64
RNF4-209ENST00000507784 MKNK1Q9BUB5 465 aa19.06■□□□□ 0.64
RNF4-209ENST00000507784 METTL14Q9HCE5 456 aaKnown RBP19.06■□□□□ 0.64
RNF4-209ENST00000507784 ARMCX3Q9UH62 379 aaPredicted RBP19.06■□□□□ 0.64
RNF4-209ENST00000507784 CEP350Q5VT06 3117 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 CNTNAP2Q9UHC6 1331 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 KIAA0391O15091 583 aaKnown RBP19.05■□□□□ 0.64
RNF4-209ENST00000507784 TPM3P06753 285 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 KRT13P13646 458 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 ARF4P18085 180 aaPredicted RBP19.05■□□□□ 0.64
RNF4-209ENST00000507784 MGAT3Q09327 533 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 TRIM71Q2Q1W2 868 aaKnown RBP19.05■□□□□ 0.64
RNF4-209ENST00000507784 ZNF568Q3ZCX4 644 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 EEF1DP3Q658K8 133 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 MPZL3Q6UWV2 235 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 FAM126BQ8IXS8 530 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 DRC7Q8IY82 874 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 CCDC155Q8N6L0 562 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 TMEM40Q8WWA1 233 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 PAWRQ96IZ0 340 aaKnown RBP19.05■□□□□ 0.64
RNF4-209ENST00000507784 HAPLN2Q9GZV7 340 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 C11orf49Q9H6J7 331 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 TNFSF13BQ9Y275 285 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 NOC2LQ9Y3T9 749 aaKnown RBP19.05■□□□□ 0.64
RNF4-209ENST00000507784 STYXL1Q9Y6J8 313 aa19.05■□□□□ 0.64
RNF4-209ENST00000507784 MROH7Q68CQ1 1323 aa19.04■□□□□ 0.64
RNF4-209ENST00000507784 EXTL3O43909 919 aa19.04■□□□□ 0.64
RNF4-209ENST00000507784 RPS6KA5O75582 802 aa19.04■□□□□ 0.64
RNF4-209ENST00000507784 LDHAP00338 332 aaKnown RBP19.04■□□□□ 0.64
RNF4-209ENST00000507784 MAN2A1Q16706 1144 aa19.04■□□□□ 0.64
RNF4-209ENST00000507784 DCAF17Q5H9S7 520 aaPredicted RBP19.04■□□□□ 0.64
RNF4-209ENST00000507784 ZNF618Q5T7W0 954 aa19.04■□□□□ 0.64
RNF4-209ENST00000507784 TCERG1LQ5VWI1 586 aa19.04■□□□□ 0.64
RNF4-209ENST00000507784 PDZD7Q9H5P4 517 aa19.04■□□□□ 0.64
RNF4-209ENST00000507784 KIAA1586Q9HCI6 787 aa19.04■□□□□ 0.64
RNF4-209ENST00000507784 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.04■□□□□ 0.64
RNF4-209ENST00000507784 A0A0B4J269 797 aa19.03■□□□□ 0.64
RNF4-209ENST00000507784 ZNF233A6NK53 670 aa19.03■□□□□ 0.64
RNF4-209ENST00000507784 CKBP12277 381 aa19.03■□□□□ 0.64
RNF4-209ENST00000507784 ACOT2P49753 483 aa19.03■□□□□ 0.64
RNF4-209ENST00000507784 MARSP56192 900 aaKnown RBP19.03■□□□□ 0.64
RNF4-209ENST00000507784 NFX1Q12986 1120 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms