RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 KCNK18Q7Z418 384 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 GPBP1Q86WP2 473 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 BSNDQ8WZ55 320 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 MRPS27Q92552 414 aaKnown RBP17.22■□□□□ 0.35
COL1A1-211ENST00000507689 EIF2AQ9BY44 585 aaKnown RBP17.22■□□□□ 0.35
COL1A1-211ENST00000507689 CCSER1Q9C0I3 900 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 ZHX3Q9H4I2 956 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 IGFLR1Q9H665 355 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 POLD4Q9HCU8 107 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 TBC1D13Q9NVG8 400 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 FAM50BQ9Y247 325 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 FAM13AO94988 1023 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 ALDH2P05091 517 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 PLS3P13797 630 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 PLCG1P19174 1290 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 SCP2P22307 547 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 SLC12A3P55017 1021 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 PTPAQ15257 358 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 AMHR2Q16671 573 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 ATF7IP2Q5U623 682 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 AGMOQ6ZNB7 445 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 CCDC73Q6ZRK6 1079 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 LRRC55Q6ZSA7 311 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 TMC7Q7Z402 723 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 LARP4BQ92615 738 aaKnown RBP17.21■□□□□ 0.35
COL1A1-211ENST00000507689 USP28Q96RU2 1077 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 TCHPQ9BT92 498 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 KIFC3Q9BVG8 833 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 MRPL4Q9BYD3 311 aaKnown RBP17.21■□□□□ 0.35
COL1A1-211ENST00000507689 TMEM134Q9H6X4 195 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 TLE6Q9H808 572 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 UBE2ZQ9H832 354 aaPredicted RBP17.21■□□□□ 0.35
COL1A1-211ENST00000507689 NGRNQ9NPE2 291 aaKnown RBP17.21■□□□□ 0.35
COL1A1-211ENST00000507689 CLDND1Q9NY35 253 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 STK17AQ9UEE5 414 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 CFAP45Q9UL16 551 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 ODF2LQ9ULJ1 636 aa17.21■□□□□ 0.35
COL1A1-211ENST00000507689 FNDC1Q4ZHG4 1894 aaPredicted RBP17.2■□□□□ 0.34
COL1A1-211ENST00000507689 POMCP01189 267 aa17.2■□□□□ 0.34
COL1A1-211ENST00000507689 KCNA5P22460 613 aa17.2■□□□□ 0.34
COL1A1-211ENST00000507689 ABCD1P33897 745 aa17.2■□□□□ 0.34
COL1A1-211ENST00000507689 PUS10Q3MIT2 529 aaKnown RBP17.2■□□□□ 0.34
COL1A1-211ENST00000507689 ATL3Q6DD88 541 aa17.2■□□□□ 0.34
COL1A1-211ENST00000507689 CDR2LQ86X02 465 aaPredicted RBP17.2■□□□□ 0.34
COL1A1-211ENST00000507689 SMG8Q8ND04 991 aaKnown RBP17.2■□□□□ 0.34
COL1A1-211ENST00000507689 RAD54LQ92698 747 aa17.2■□□□□ 0.34
COL1A1-211ENST00000507689 TCF25Q9BQ70 676 aa17.2■□□□□ 0.34
COL1A1-211ENST00000507689 TMEM175Q9BSA9 504 aa17.2■□□□□ 0.34
COL1A1-211ENST00000507689 NXF3Q9H4D5 531 aaKnown RBP17.2■□□□□ 0.34
COL1A1-211ENST00000507689 HCSTQ9UBK5 93 aa17.2■□□□□ 0.34
COL1A1-211ENST00000507689 FBXO2Q9UK22 296 aaPredicted RBP17.2■□□□□ 0.34
COL1A1-211ENST00000507689 FAN1Q9Y2M0 1017 aa17.2■□□□□ 0.34
COL1A1-211ENST00000507689 HES2Q9Y543 173 aa17.2■□□□□ 0.34
COL1A1-211ENST00000507689 PRRC2BQ5JSZ5 2229 aaKnown RBP17.19■□□□□ 0.34
COL1A1-211ENST00000507689 ARL5CA6NH57 179 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 MEIS3P2A8K0S8 358 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 SFI1A8K8P3 1242 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 DLL1O00548 723 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 SPTLC2O15270 562 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 SLC16A4O15374 487 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 F13A1P00488 732 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 DDIT3P35638 169 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 PBX3P40426 434 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 MLH1P40692 756 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 MATR3P43243 847 aaKnown RBP eCLIP17.19■□□□□ 0.34
COL1A1-211ENST00000507689 NASPP49321 788 aaPredicted RBP17.19■□□□□ 0.34
COL1A1-211ENST00000507689 YARSP54577 528 aaKnown RBP17.19■□□□□ 0.34
COL1A1-211ENST00000507689 SMC1AQ14683 1233 aaKnown RBP17.19■□□□□ 0.34
COL1A1-211ENST00000507689 SPECC1Q5M775 1068 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 SLC39A11Q8N1S5 342 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 MYCT1Q8N699 235 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 SPIRE2Q8WWL2 714 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 PABPC5Q96DU9 382 aaKnown RBP17.19■□□□□ 0.34
COL1A1-211ENST00000507689 BICD1Q96G01 975 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 EPSTI1Q96J88 318 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 GAD1Q99259 594 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 CDCA3Q99618 268 aaPredicted RBP17.19■□□□□ 0.34
COL1A1-211ENST00000507689 CCDC113Q9H0I3 377 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 PDZD7Q9H5P4 517 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 NRDE2Q9H7Z3 1164 aa17.19■□□□□ 0.34
COL1A1-211ENST00000507689 TFIP11Q9UBB9 837 aaKnown RBP17.19■□□□□ 0.34
COL1A1-211ENST00000507689 MORC2Q9Y6X9 1032 aaPredicted RBP17.19■□□□□ 0.34
COL1A1-211ENST00000507689 ZMYM2Q9UBW7 1377 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 YEATS4O95619 227 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 AKAP5P24588 427 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 STAT6P42226 847 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 NDUFV1P49821 464 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 TFF2Q03403 129 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 GRIN1Q05586 938 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 GIT2Q14161 759 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 MCM6Q14566 821 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 FOXD4L6Q3SYB3 417 aaPredicted RBP17.18■□□□□ 0.34
COL1A1-211ENST00000507689 PLPP4Q5VZY2 271 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 FOXD4L3Q6VB84 417 aaPredicted RBP17.18■□□□□ 0.34
COL1A1-211ENST00000507689 SV2BQ7L1I2 683 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 RBM23Q86U06 439 aaKnown RBP17.18■□□□□ 0.34
COL1A1-211ENST00000507689 KCNG4Q8TDN1 519 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 CLIC6Q96NY7 704 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 CCDC94Q9BW85 323 aaPredicted RBP17.18■□□□□ 0.34
COL1A1-211ENST00000507689 LRRC27Q9C0I9 530 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms