RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ADHFE1Q8IWW8 467 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 BCL7CQ8WUZ0 217 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 BSNDQ8WZ55 320 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 IGSF21Q96ID5 467 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 CPB2Q96IY4 423 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 ZBP1Q9H171 429 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 FZD8Q9H461 694 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 ENTPD7Q9NQZ7 604 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 DNAJB4Q9UDY4 337 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 BARX2Q9UMQ3 279 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 INPP5FQ9Y2H2 1132 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 IPPQ9Y573 584 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 IRAK3Q9Y616 596 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 ZMYM2Q9UBW7 1377 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 ARHGEF35A5YM69 484 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 C2orf71A6NGG8 1288 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 PI4K2BG5E9Z4 385 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 DDHD2O94830 711 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 ITGA4P13612 1032 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 SLC11A1P49279 550 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 ATP2C1P98194 919 aaPredicted RBP10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 RNASELQ05823 741 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 DSC1Q08554 894 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 SMC1AQ14683 1233 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 MAEAQ7L5Y9 396 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 TMC7Q7Z402 723 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 DDX53Q86TM3 631 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 MRPL43Q8N983 215 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 URGCPQ8TCY9 931 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 SNX29Q8TEQ0 813 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 SUSD6Q92537 303 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 TMEM169Q96HH4 297 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 PRIMPOLQ96LW4 560 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 TMEM175Q9BSA9 504 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 MMTAG2Q9BU76 263 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 VN1R3Q9BXE9 311 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 C1QTNF1Q9BXJ1 281 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 CCDC113Q9H0I3 377 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 BHMT2Q9H2M3 363 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 EPHX3Q9H6B9 360 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 UBN1Q9NPG3 1134 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 PRMT7Q9NVM4 692 aaPredicted RBP10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 KANSL3Q9P2N6 904 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 KIAA1024Q9UPX6 916 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 HES2Q9Y543 173 aa10.05□□□□□ -0.8
PDLIM5-209ENST00000506632 ARL5CA6NH57 179 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 LRRIQ4A6NIV6 560 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 TTLL13PA6NNM8 815 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 PP2D1A8MPX8 630 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 EFEMP2O95967 443 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 EDN1P05305 212 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 CTSAP10619 480 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 NAMPTP43490 491 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 NCBP1Q09161 790 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 CUL4AQ13619 759 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 HYIQ5T013 277 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 MCTP1Q6DN14 999 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 ANKRD54Q6NXT1 300 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 SLC27A1Q6PCB7 646 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 COLGALT2Q8IYK4 626 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 VPS52Q8N1B4 723 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 GSTCDQ8NEC7 633 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 GAD1Q99259 594 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 RAB34Q9BZG1 259 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 C2orf40Q9H1Z8 148 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 S1PR5Q9H228 398 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 NXF3Q9H4D5 531 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 C11orf16Q9NQ32 467 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 DDX19AQ9NUU7 478 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 MIOSQ9NXC5 875 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 SMC3Q9UQE7 1217 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 GIT1Q9Y2X7 761 aa10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 USP15Q9Y4E8 981 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-209ENST00000506632 E9PMD0 336 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 H3BQV1 296 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 NRP1O14786 923 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 CLASP2O75122 1294 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 POMCP01189 267 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 CDC25AP30304 524 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 SSTR3P32745 418 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 MLH1P40692 756 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 SCNN1GP51170 649 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 PPP2R5AQ15172 486 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 KRT79Q5XKE5 535 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 ARL6IP4Q66PJ3 421 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 SYCE2Q6PIF2 218 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 DTHD1Q6ZMT9 781 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 KCNK18Q7Z418 384 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 CDR2LQ86X02 465 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 ZBTB8OSQ8IWT0 167 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 RNF168Q8IYW5 571 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 DAW1Q8N136 415 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 KIFAP3Q92845 792 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 ZFP42Q96MM3 310 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 POP1Q99575 1024 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 GBP3Q9H0R5 595 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 PDZD7Q9H5P4 517 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 MARCH5Q9NX47 278 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 STK39Q9UEW8 545 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms